| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1349 |
|---|
| Symbol | |
|---|
| ID | 8380526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 1444367 |
|---|
| End bp | 1445560 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 645004098 |
|---|
| Product | aminodeoxychorismate lyase |
|---|
| Protein accession | YP_003161308 |
|---|
| Protein GI | 256832581 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATGATC TCTTTGACAC ATTGAGTCAA GAGGACCATA CGACCCCCCG GTTGTCGCGC
CAACAGCGGC GTGCTCTCGC CGCGAAGAAG AAGCGTGAAG CAGCGAGGAG ACGGAAGTCT
CTGATCGCCG TGTTCTTTGC TGTCCTGATT TTTGGTGGCG GTATTGCTTT TGCCTGGTCG
TGGGGTGTGG AGTTCTTCAA TGGTCTGTCG TTCAACGCGC CTCGCGTATC TGAAGCCCCG
GCTGACTACG AGGGTGAAGG AACTGAAGCT GTTGAAGTCA CGGTGAATGA GGGGGATACG
GGAGCTGCCA TCGCAACGAC TCTTGTCGCG GCGGATGTGG TGGCATCGGA AGGTGCGTTC
GTGTCAGCAG CGAACGCCCA CCCAGATGCT GCAGGGATCC AGCCAGGGAC GTACACGTTG
TACAAAAAAA TCCCAGCCTC AAAAGCCGTA GAGATGCTCC TTGATTTGAA CAACTTGTCA
GGGAACCGAG TTCAGGTGAT CCCTGGCATG ACGGTGAAAG ATGTCATTCA GAAAATGAAG
GCAGTCACCG GATTTAGTGA TGACCAAATT AATGCAGCAT TGGACAACAC TGAGGCAACT
GGTCTTCCTG AGCAGGCTGA GGGGTCGTAT GAGGGGTGGC TCGCAGATGG GGACTACCGT
TTCTCAGCAG ATGTGACACC TGAGGAGATG TTCGCTGACA TGGTCGCTCG CCAGCGCAAG
CGGCTTGCAG ACATGGGGGT GAAGAAAGCA GAGTGGGAAC GGACCCTCAA GATTGCGTCA
ATTGTGCAGT TGGAAGGTCG TAATGATGAC TTCCCCAACA TTGCATCGGT GATTGAGAAC
CGACTCGACA TCGACATGAA GTTGCAAATG GACTCCACGG TTCACTACGT TCATGGCGGG
CGCGGAAACG CGTCAACGAC CTCTGCTGAG CGTGCAGATG ACAACCCGTG GAACACCTAT
AAGTACAAAG GTCTGCCGAA GACACCTATT GGGTCACCGT CTGCTGCTGC GATTGAAGCG
GTGCTGAACC CACCCAGCAC CGACTACCTT TTCTTTGTGA CGGTTAACCC GAACTCTGGG
GAAACGAAAT TCGCAGAAAC GTGGAGTGGT CACGAAGCAA ATGTTGCCGA GTATCAGCAG
TGGCTTCGCG ACAATGAGGA AGCAATGACT CAGTCGGCGG ATGGTGATTC GTGA
|
|---|
| Protein sequence | MNDLFDTLSQ EDHTTPRLSR QQRRALAAKK KREAARRRKS LIAVFFAVLI FGGGIAFAWS
WGVEFFNGLS FNAPRVSEAP ADYEGEGTEA VEVTVNEGDT GAAIATTLVA ADVVASEGAF
VSAANAHPDA AGIQPGTYTL YKKIPASKAV EMLLDLNNLS GNRVQVIPGM TVKDVIQKMK
AVTGFSDDQI NAALDNTEAT GLPEQAEGSY EGWLADGDYR FSADVTPEEM FADMVARQRK
RLADMGVKKA EWERTLKIAS IVQLEGRNDD FPNIASVIEN RLDIDMKLQM DSTVHYVHGG
RGNASTTSAE RADDNPWNTY KYKGLPKTPI GSPSAAAIEA VLNPPSTDYL FFVTVNPNSG
ETKFAETWSG HEANVAEYQQ WLRDNEEAMT QSADGDS
|
|---|
| |