| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1348 |
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| Symbol | |
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| ID | 8380525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1443540 |
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| End bp | 1444370 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645004097 |
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| Product | Shikimate dehydrogenase substrate binding domain protein |
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| Protein accession | YP_003161307 |
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| Protein GI | 256832580 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase
[TIGR01809] shikimate-5-dehydrogenase, fungal AROM-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGTCTC TTGCAGCTGT TCTTGGCCAC CCGATCAGCC ATTCGCTGTC TCCAGTCCTC
CACCAGTCGG CATATGACGC CCTAGGGTTG GACTGGCGCT ACGAACACCA TGACGTTGAC
CGTGACGAGC TTGCCGGTTT TCTTGCAACT TTGGGGGAGC AGTGGCGAGG CCTGTCACTG
ACAATGCCCC TGAAACACGA GATCTTTCAG CACCTTGATT TTGTCGATCC ACTGGCTGAG
GTCACGGGGT CTGTTAACAC CGTCATGATT CAGCGGACGG GTGCACGTCG CACTCTGACG
GGTGCGAACA CAGACGTTCA GGGAATCGTC GATGCGTTAG CTGAAGCAGG TGCAGTCACA
GCGACAACAA GCGTTGTTGT GGGCGCGGGG GCGACTGCCA GTTCTGCTCT CGCAGCGCTG
GCGCAACTCG GAGACGCAAA TCCTACTGTC CTTGTTCGTT CTCTTGCCCG CACGGCCGTC
CTACGGCAAG CCGCCCAACG AATGGGCGTC ACACCGACGT TCCATGTGCT TGACGATGCG
TGGGAAAGCA TCCTTAGCGC CGATGTCGTC GTATCCACCT TGCCGCCGCA CGCGGCGGAC
CCCATAGCGG AACACATCGG CAAACGAAAA ATACGCATCA ACGGGGCGCT ATTGGACGTG
GCGTACGATC CGCGACCCAC GGCGCTCACC ACCGCGTGGA CAACGCTCGG TGGTCGGTGC
GTCACCGGCG AACGGATGCT GCTCCATCAA GCTGCGGCCC AGGTCCACCT CATGACTGGT
CGCACAGCTC CACTCGACGT GATGGACCAG GCGCTTTCCA ACGCGTTGTA A
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| Protein sequence | MTSLAAVLGH PISHSLSPVL HQSAYDALGL DWRYEHHDVD RDELAGFLAT LGEQWRGLSL
TMPLKHEIFQ HLDFVDPLAE VTGSVNTVMI QRTGARRTLT GANTDVQGIV DALAEAGAVT
ATTSVVVGAG ATASSALAAL AQLGDANPTV LVRSLARTAV LRQAAQRMGV TPTFHVLDDA
WESILSADVV VSTLPPHAAD PIAEHIGKRK IRINGALLDV AYDPRPTALT TAWTTLGGRC
VTGERMLLHQ AAAQVHLMTG RTAPLDVMDQ ALSNAL
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