| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1279 |
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| Symbol | |
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| ID | 8380456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1369043 |
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| End bp | 1370050 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645004028 |
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| Product | integrase family protein |
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| Protein accession | YP_003161238 |
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| Protein GI | 256832511 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTCCG TCCTCCATAA CTCATCACCG CATCCACTAA CTGCGCAACA GCACGCAGAT
GTGCACAGGC TCATTGAGCA CTCCCGTGCG TCGCATACAA AGAAAACTTA CGAAGTTGGG
GTGCGTTCCT GGCAAAGATA TGCAACCACG TACCGGTACA CACTTTTCCC AGCAACACCT
AGCGAAGTGG CACTGTGGCT CAGTGACCTG TTTGATCAAG GAAAATCAAC AGCAACTGTC
CGGACCTACC TCCAGTCACT GCGCGACTAT CACCGGGAAC GTGGATCACA AGCACTTGAC
GACGTGGAAG GCATTCGTCG TGTCATTGCC GGGATTTCAC GGCTCAACAG GGAAAAAGAT
GTTCGAAAAG CTCGCGCTTT GTCGCCCACT GAAGTTGTCA TGCTTGTCTC CTATGCGCGG
ATGCTCCAGT CGCCTCGCGG CACACGAGAC GCCGCGTGGT GGCTTCTCGC AACATCACTT
GGTCTACGCT ACTCAGACAG CGTTGTCCTC CAGCGCCGTG ATGTACGTCT GGTACCAGAC
AAGGGAGCGG TTATTACGGT GCGATACTCG AAAACAGACC AGTATGCGAC AGGAGCCCAG
TTAGCACTCT CGCAGTCATC AATGGCCCAT ATCGATCCTG TCCGTGCTAT CCAGGATCTC
TTGCGCATAC TCCCTGAGGA GCCGACAACC CCACTTTTTC AGGGGCTTCG AAAGAATGGT
CGGTGGACCG GACAATCATT ATCCAATGTC GGCCTGAACA AGGCAATCGC CAGACTTGCT
GATGAATCAG GCATTAACAC TGAACAGGTA ACAACACACA GTGCACGCGC TACCTTCGCA
ACCAATGCAT ACATTGCTGG TATCGACGAA TCGGCTATAG CTATGACAGG TCGTTGGAAA
TCACTAAGTA TTCAGCGTTC CTACCGAAGA GTCGATGATG ACTCAATGTT TGATAAACGC
GCTTCCGCCT CGCACTGGTT AGAAGAGTCT TTACGGTCGA GACACTGA
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| Protein sequence | MDSVLHNSSP HPLTAQQHAD VHRLIEHSRA SHTKKTYEVG VRSWQRYATT YRYTLFPATP
SEVALWLSDL FDQGKSTATV RTYLQSLRDY HRERGSQALD DVEGIRRVIA GISRLNREKD
VRKARALSPT EVVMLVSYAR MLQSPRGTRD AAWWLLATSL GLRYSDSVVL QRRDVRLVPD
KGAVITVRYS KTDQYATGAQ LALSQSSMAH IDPVRAIQDL LRILPEEPTT PLFQGLRKNG
RWTGQSLSNV GLNKAIARLA DESGINTEQV TTHSARATFA TNAYIAGIDE SAIAMTGRWK
SLSIQRSYRR VDDDSMFDKR ASASHWLEES LRSRH
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