| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1269 |
|---|
| Symbol | |
|---|
| ID | 8380446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 1360435 |
|---|
| End bp | 1361061 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645004017 |
|---|
| Product | chromosome segregation and condensation protein, ScpB |
|---|
| Protein accession | YP_003161228 |
|---|
| Protein GI | 256832501 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
|---|
| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.766726 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACA AACTCACAGT TGATCCACAC ATACTCGGGG GATGCGAAGC AGTCCTCATG
GTCGCTGATT CACCTGTGAC CACCCACGAC TTCGCTGAAG CGCTTGGTGT GAGTGTGGAA
CACGTCAAGG ACGCGCTGAC CTACCTTCGT GATGAGTATG ACGGACTCCA TGACGGACGA
ACACGTGGTT ATCAGTTGCG GACCACTGGT GCGGGGTGGC GCATCTACTC TTCCGCGCAC
TACCACGACA TTGTCACTCA TTTTGTCACC GCAGGTAAGA CCGCTAGACT CTCTGGGGCT
GCACTAGAAA CTTTGGCGGT CATCGCGTAT CGCCAGCCAG TCACACGAGC AGCCATCCAA
ACTATTAGAG GTGTCAGCGT TGATGGAGTA GTCCGCACAC TACTGAGTCG TGAACTCATT
GAGGAAGTGG GCTCCGAACC AGGAACCGGG GCATCCTTGT ATGGGACCAC CGCCACATTC
CTCGAACGCA TGGGGTTAGC TTCCCTCGAG GAACTACCAC ACCTTGCCCC AGCGCTGCCG
GATCGCCAGG AAATGGCTGA GCTCGCACGC ACCGTTGAAG ACTATGACCA CAGCGACCCA
GGTCGCTCAC CACTTGCAGG ACGCTGA
|
|---|
| Protein sequence | MADKLTVDPH ILGGCEAVLM VADSPVTTHD FAEALGVSVE HVKDALTYLR DEYDGLHDGR
TRGYQLRTTG AGWRIYSSAH YHDIVTHFVT AGKTARLSGA ALETLAVIAY RQPVTRAAIQ
TIRGVSVDGV VRTLLSRELI EEVGSEPGTG ASLYGTTATF LERMGLASLE ELPHLAPALP
DRQEMAELAR TVEDYDHSDP GRSPLAGR
|
|---|
| |