Gene Jden_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1250 
Symbol 
ID8380427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1338316 
End bp1338699 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content57% 
IMG OID645003998 
ProductYCII-related 
Protein accessionYP_003161209 
Protein GI256832482 
COG category[S] Function unknown 
COG ID[COG2350] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.27136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGGG GTGAAGTTCG CACCGTGGGT ATACCGGATC GTAACGTTTC GGCGCGTGGT 
TTGGTGAGGG CTCCGTGGTT GAATGTGGGC ATGCAGACTT TTGCGATCAC CTATGTGTAT
TCCGAGGACA CGGCGGCGTT GGATGAGCAT CGGCCTGCGC ATCGTGCGTA TTTGAGTGCG
TTGGCGGCGT CTGGTTCGCT TCTTGCCTCT GGTCCCGTGC GTCAGGAAGA CATGACTGGG
GCACTCATTA TTGTTCAGGC CCCGCATGCC GGTGCAGCGA TCGCTTTGTT AGAAGGCGAT
CCGTTTTGGC AGCAGGGGTT GGTGTTAGAT CGTGCTGTTG TGGAGTGGAA CATTGTCATT
GGTGCGTGGG CAGAGACCGA GTAA
 
Protein sequence
MSRGEVRTVG IPDRNVSARG LVRAPWLNVG MQTFAITYVY SEDTAALDEH RPAHRAYLSA 
LAASGSLLAS GPVRQEDMTG ALIIVQAPHA GAAIALLEGD PFWQQGLVLD RAVVEWNIVI
GAWAETE