| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1234 |
|---|
| Symbol | |
|---|
| ID | 8380411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 1320029 |
|---|
| End bp | 1320883 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645003982 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_003161193 |
|---|
| Protein GI | 256832466 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2345] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.140671 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAAT CCATTGGCCA CTTCGGGTTT GACGGAACAA CTGGGCGTTC CGACTACGGA
GGCCGCCGTA CGCACATCAT TCAATTGCTC CGCGACTCCA AAGACCCGTT GTCGGTGTCT
GAAGTGGCCG ACCGAGTGGG CATCCATCTC AACACCGCCC GCTTTCACTT GGAGTCCCTT
GTCGATTCGG GCCTTGCACA GCGCACGCAG CAACCTCGTT CCACACCAGG GCGCCCAAAG
ATCTTGTATC TGGGTACACT GCCCAACCAG ACTCACGAAC GTGCTCAGGC CTACCGGGTC
CTTGCTGAGG CATTGACGAT CGCGGTTGCT GATAACGTGC CTGACGCATC GGCCATCATG
TACTCCGTGG GGAAACGATG GGGACAGTTT GTCACCGAAG CTCCCAGTGA GGCTGAGCAC
CCTAGTGAAG ACGATCTGCT GACCCGAGTG CTGACAAAAC TTGACGCGTT GTGGTTCGCT
CCGGAGTTGA CCGACGACTT GGGGCAATCC ACTCGTGACG CCGACCAAGT CACGGGAAAA
ACCAATATCG CCCCCGACGA AGAACACCGT TTTGATGAGC GTGGGTTGCT GTTTCACAAC
TGCCCGTTCG CTGACGCGGC CCGTAGCGCC CCGGAGGCTG TGTGTGCGTT GCATGCGGGT
TTGCTCAACG GGTCTTTGGA AGAGTTGAAC TCCACGCAAC GAACCACGCG TATTGTTCCG
TTGCTTGGTC AACACCACTG TGCTGCCCCG TTGACAACTG TTGCGCGAGG GTTTGAGGAC
AGTGAGGGTG TCATCGTTGA TACTCGTTTT GTCTCTCACC ACGCTTCGAT CCCTTCCTCT
CCAGCGCCTC AATAA
|
|---|
| Protein sequence | MPKSIGHFGF DGTTGRSDYG GRRTHIIQLL RDSKDPLSVS EVADRVGIHL NTARFHLESL
VDSGLAQRTQ QPRSTPGRPK ILYLGTLPNQ THERAQAYRV LAEALTIAVA DNVPDASAIM
YSVGKRWGQF VTEAPSEAEH PSEDDLLTRV LTKLDALWFA PELTDDLGQS TRDADQVTGK
TNIAPDEEHR FDERGLLFHN CPFADAARSA PEAVCALHAG LLNGSLEELN STQRTTRIVP
LLGQHHCAAP LTTVARGFED SEGVIVDTRF VSHHASIPSS PAPQ
|
|---|
| |