| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1231 |
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| Symbol | |
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| ID | 8380408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1315730 |
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| End bp | 1317625 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645003979 |
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| Product | ABC transporter related |
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| Protein accession | YP_003161190 |
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| Protein GI | 256832463 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.127011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAATGC ATCGCCCCGG AGGCGGCGGC CCCGGAAGCC CATTTCGAAG CTTCCAGCAA
GACTCCTCCG TCACCAACCA CGAACTGCGT GCAGACACCC TGCGCAGGGT AATCAGCTTT
GGGCGCCCCT ACACGCGCCA ACTCACCATT TTCCTCACCC TCATTGCAGC CGCCGCCGCA
ACCACAGCAC TCCAACCCCT CCTCTTCCAA CGCATTATCG ACCAAGGAAT CACCCAAAAC
GACCGTCACA CCGTCATCAC CTATGCCCTC CTCATCGCTG GACTCGCGCT CGCCTCTGCG
GGCCTGACCA TCGCAGAACG CATCACCTCA GCAAAAATCG GCGAAGGAAT CATCTACGAC
CTACGCACCG CCATCTTCGC CCACGTTCAA CGTATGCCCA TCGCGTTCTT CGCCCGCACA
AAAACAGGCG CGCTGGTCCA GCGACTCAAC TCAGACGTCC TTGGGGCACA ACAAGCCTTC
ACCTCAACGT TGTCCCAAGT TGTCTCCAAC ACGCTGACCG TCATCTTCGT CCTGGCCGCC
ATGATGACAC TGTCGTGGAA ACTCACACTG CTGGCCCTCA TTTTGCTCCC TGCCTTCATC
TTCCCTGCCC GGTGGATCGG TCCACGCCTT GCCGCCATCA CAAGGAAAAG CTACGACCTC
AACGCCGATG CGGCTCACAC CATGAACGAA CGCTTCAACG TCGCCGGTGC CTACCTTGCC
CACACCTACG GTCGCCCCGA GAACGACCTC ACGACATTCT CCAACCAAGC CAGCCAAGTC
CGGGACATCG GTGTCACAAC AGCTCTTTAT CAAGTTGTCT TCCGTGTCAC ACTGACCACA
GTGTCTGCGC TCGCAATCGC GGCAGTGTAT GGGTTGGGCG GGCTTTCAGC CATTAATGGT
GAGCTCAGTG TTGGTGTCGT CGTAGCGTTG GCTGCCTACC TGGGGCAGCT TTACGCTCCC
CTGACAGCAC TCTCAAATGT CCACGTCACT GTGATGACGG CGCTCGTCTC CTTTGAACGG
GTCCTTGAGG TCCTTGACCT ACAACCGATG ATCAAAGAAA TCGACCATCC CATCAACCTC
ACCCAGGCGA TCGCTCACCA TGGCGCCCGC ATCGAATTCG ATAACGTCAG CTTCACTTAC
CCGCGAGCCA CTGACGTTTC CATCGCTTCT TTAGAAAGTG TCACCCACCT CACCAACGAC
CCCACGGGTC CCACATTGCG CTCCTTGAGT TTCACCGTGG AACCTGGGAC TACAGTGGCC
CTTGTCGGGC CCTCCGGTGC GGGGAAGACG ACGTTATCTC ACCTCATCGC ACGCATCTAT
GACCCTACTG ATGGCGCTAT CCGCATCGCT GGGACTCAGC TCACTGACGC GTCGCTGGAT
AGCATCCGAG CCTCAGTGGG GGTCGTCATG CAAGACGCCC ACATGTTTCA CCAGTCCATT
GCCGATAATC TCCGCTACGC TAACCCACAA GCAACCGACG AACAACTCAC CCAAGCACTG
GCCCGTGCCC ACATCCTTCC TCTCGTGAAC ACCCTGCCCC AAGGCATCAA CACTGTCATT
GGGGACCGTG GTTATCGTAT GTCAGGAGGG GAACGCCAGC GTCTGGCGAT CGCCAGACTC
CTGCTCAAAG AGCCAGACAT TGTGGTGTTG GATGAAGCCA CAGCTCATCT CGACTCCGAA
TCAGAAGCAG CAGTGTCGGC CGCCCTCCGT GAGGCCCTCG CAGGGCGAAC AGCGCTGGTC
ATTGCACACA GGTTGTCCAC AGTGCGTGAC GCTGATGCAA TCCTTGTCCT TGATCAAGGA
CGCATCGTGG AACAAGGGAC GCACCAAGAG CTCCTTACCC GAGAAGGGCT TTACGCTGAG
TTGTACCACA CACAATTTGC TGATCAAGCC CGGTAG
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| Protein sequence | MTMHRPGGGG PGSPFRSFQQ DSSVTNHELR ADTLRRVISF GRPYTRQLTI FLTLIAAAAA
TTALQPLLFQ RIIDQGITQN DRHTVITYAL LIAGLALASA GLTIAERITS AKIGEGIIYD
LRTAIFAHVQ RMPIAFFART KTGALVQRLN SDVLGAQQAF TSTLSQVVSN TLTVIFVLAA
MMTLSWKLTL LALILLPAFI FPARWIGPRL AAITRKSYDL NADAAHTMNE RFNVAGAYLA
HTYGRPENDL TTFSNQASQV RDIGVTTALY QVVFRVTLTT VSALAIAAVY GLGGLSAING
ELSVGVVVAL AAYLGQLYAP LTALSNVHVT VMTALVSFER VLEVLDLQPM IKEIDHPINL
TQAIAHHGAR IEFDNVSFTY PRATDVSIAS LESVTHLTND PTGPTLRSLS FTVEPGTTVA
LVGPSGAGKT TLSHLIARIY DPTDGAIRIA GTQLTDASLD SIRASVGVVM QDAHMFHQSI
ADNLRYANPQ ATDEQLTQAL ARAHILPLVN TLPQGINTVI GDRGYRMSGG ERQRLAIARL
LLKEPDIVVL DEATAHLDSE SEAAVSAALR EALAGRTALV IAHRLSTVRD ADAILVLDQG
RIVEQGTHQE LLTREGLYAE LYHTQFADQA R
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