Gene Jden_1206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1206 
Symbol 
ID8380383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1284140 
End bp1285519 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content55% 
IMG OID645003953 
Productprotein of unknown function DUF245 domain protein 
Protein accessionYP_003161165 
Protein GI256832438 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.289494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGCC GCATTTTTGG ACTCGAAACT GAGTACGGTA TCACTTACGC GCACCCGACA 
GACGATGTGA CATTGTCTGC TGACGAGGTG GCCCGTCAAC TCTTTAAAAA GGTTGTGGCG
TGGGGACGGT CCTCGAATGT TTTTCTTCGT AATGGTTCTC GACTTTACTT GGATGTTGGT
TCACATCCCG AGTACGCAAC TGCTGAATGT GACTCAGTTG AGCAACTGAT TGCCCATGAT
CGCGGCGGAG AACTGATTCT GGTTGATCTT ATTGACGATG CGCAACGCCG CCTGGCTCAA
GAGGGGTACA CCGGGACTAT TCACCTGCTG AAAAATAATA CTGATTCTGC CGGGAATTCC
TATGGGTGCC ACGAGAACTA TTTGGTGCGT AGGCAGGGTG ACTTTACCCG GCTCGCTGAT
ATTCTCATTC CATTTCTGAT CACCCGGCAG GTTGTTGTGG GCGCTGGCAA AATCATGTCC
ACCCCCCAAG GCCCTCGGTA CTGTTTTTCC CAGCGTGCGG ACCATATGTG GGAAGCGGTG
TCCAGCGCAA CAACACGCTC ACGCCCCATC ATTAATACCC GTGATGAACC CCATGCGGAT
GCCGAGTTTT ACCGGCGGCT CCACGTCATT GTGGGAGACT CCAATATTGC GGAGCCCACA
ACCTTCCTGA AGGTGGGTGC AACGGACATG GTGTTGCGAC TCATTGAGGC CGGCGTTCCG
ATGCGGGATC TTGCGTTGGA TAACGCTATG CGTGCGATCC GTGAAATCTC CCACGACATC
ACGGGGCGTG CCACGGTGAC GCTGAGCTCA GGAAAGACTG TGACGGCATG GCAACTTCAA
GAAATGTATG TGGAGAAAGT CCGCACCTAT GTGGAATCGC TGGGGCCGTT GAGCCCCACT
GACGAAGCGG TGTTTGAGTT GTGGGAACGA GCGTTACGTG CGGTAGAGAC GCAGGACCAC
AGTTTGATCG ACCGAGATAT TGATTGGGCG ATCAAGAAAC GGCTCCTTGA CCGGACGCAG
GACCGACTGG GCTGTGCTCT TGATGACCCG AGGCTGGCGC GCCTTGATCT TGCTTACCAC
GATATTTCTC CAGCTACTGG TCTTGGACAT CGTCTGGTGT CGCGTTCCAT GATGAATCGG
GTGGTGAGTG ATGCGGAGGT GGAGCGCGCA TCACAGGTTG CTCCGGAGAC GACTCGAGCG
CACTTGCGTG GGCGGTTTGT CACGGCAGCC CAGGAACAGA AGAAGGACTA CACGGTGGAT
TGGGTCCACT TAAAGCTCAA TGATCAGGCG CAGCGCACGG TGTTGTGTAA GGACCCGTTT
GCCCACGTGG ATGACCGTGT TGATCAACTC ATTGATTCCA TGAGGACACA AGCGACGTGA
 
Protein sequence
MTRRIFGLET EYGITYAHPT DDVTLSADEV ARQLFKKVVA WGRSSNVFLR NGSRLYLDVG 
SHPEYATAEC DSVEQLIAHD RGGELILVDL IDDAQRRLAQ EGYTGTIHLL KNNTDSAGNS
YGCHENYLVR RQGDFTRLAD ILIPFLITRQ VVVGAGKIMS TPQGPRYCFS QRADHMWEAV
SSATTRSRPI INTRDEPHAD AEFYRRLHVI VGDSNIAEPT TFLKVGATDM VLRLIEAGVP
MRDLALDNAM RAIREISHDI TGRATVTLSS GKTVTAWQLQ EMYVEKVRTY VESLGPLSPT
DEAVFELWER ALRAVETQDH SLIDRDIDWA IKKRLLDRTQ DRLGCALDDP RLARLDLAYH
DISPATGLGH RLVSRSMMNR VVSDAEVERA SQVAPETTRA HLRGRFVTAA QEQKKDYTVD
WVHLKLNDQA QRTVLCKDPF AHVDDRVDQL IDSMRTQAT