| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1188 |
|---|
| Symbol | |
|---|
| ID | 8380365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 1264351 |
|---|
| End bp | 1265403 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645003933 |
|---|
| Product | dihydrodipicolinate synthetase |
|---|
| Protein accession | YP_003161147 |
|---|
| Protein GI | 256832420 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0108219 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0299007 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCGGAC CCGTAGCGGC CTACCTGCCC ACGCCGCGCA ACCCCCAAGG ACGACTCAAC
GTTGACGTCC TCCAACGCCT CACCACCCGC GCCACCCGCC ACGGCGCCCA CTCCATCGCG
GTCCTCGGCT CCGTGGGAGG CGCCCCCTAC ATGCCCCGAG CCATGCGCAA AAAAACCATC
CAAGCCGCAG CTGAGGTCAC CACAGACACC AACACCCCAC TCATCGCAGG CATCGGCGCA
CTGAACACCG CCGAAGTCCT CGCCAACCTC GAAGACGCCT ACCACGCAGG AGCCACCGCA
GCCCTCCTGC AACCCATGGC CTACCACCCA CTCCTCGACA CCGAAATCCA CACCCTGTAC
GCCACCATCA CCGACATCAC CCCCATCCCC ATCTGGATTT ACAACAACCC ACGCACCACC
CAACACCACT TCAGCGCCCT GCAACTGGCC GACCTCGCTC ACCTTCCCAA CATCGGCGGA
TTCAAAGACC GCGCAGCCAA CCCCAGCGAC ATCACCCACC GCATCAACCT CATCACCCGC
CACACCACCC ACACCACCCT CGACTTTGGT TTCTCCGGTG AAGACAAAGG CGCCGACATC
CTCCTCAACA ACGCCCACAC CTGGCATTCC GCGCTCGCGG GGATCATGCC TGAGCTCACT
CATGAGATTG CGGGCGCAGC GATGGCAGGC CGGGACGATG AGAGCGCTGC AGAGTATGCC
CGGTCGTTGC AGAAGGCGTT AACCCCACTG ACCGTCATTT TTGGTCAGTA TGGTGGGATC
CGTACTGTGC ATGCGATCGC GGAACACCGG GGCATGGATT TGGGGGAGTT ACCCTCACCG
CTTGGGCCCA TGCCAAGTGC AGCCCAAGGG CTGTTGTCGG TGGCGCTGCG GTCCTTAGAA
AGAGCCCACG AGTCGTTGAC GTTACGCGCG CAAACAGCAG AGACCAACGC TGTTCCGCGT
GAAGGGGGAC GACGCGCGGG ACGAAACGTG AACACGGCCA AGGAGCCTAC GCGCGCTTCG
ACAAGCGAAT ATGTTCCGCG CCGGGCCCGG TAA
|
|---|
| Protein sequence | MLGPVAAYLP TPRNPQGRLN VDVLQRLTTR ATRHGAHSIA VLGSVGGAPY MPRAMRKKTI
QAAAEVTTDT NTPLIAGIGA LNTAEVLANL EDAYHAGATA ALLQPMAYHP LLDTEIHTLY
ATITDITPIP IWIYNNPRTT QHHFSALQLA DLAHLPNIGG FKDRAANPSD ITHRINLITR
HTTHTTLDFG FSGEDKGADI LLNNAHTWHS ALAGIMPELT HEIAGAAMAG RDDESAAEYA
RSLQKALTPL TVIFGQYGGI RTVHAIAEHR GMDLGELPSP LGPMPSAAQG LLSVALRSLE
RAHESLTLRA QTAETNAVPR EGGRRAGRNV NTAKEPTRAS TSEYVPRRAR
|
|---|
| |