Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1175 |
Symbol | |
ID | 8380352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1249740 |
End bp | 1250162 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645003920 |
Product | small multidrug resistance protein |
Protein accession | YP_003161134 |
Protein GI | 256832407 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0300462 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACTA CCCCTACCCC ACGCCGTGTC ATCACCCACG TTCGTGAACA CCTCACCGAC AACGCAGCCT GGGCGGTTCT CCTGCTTTCT GCAGCCCTCG AAGCGACCTG GGCTACTGCA CTGGGCGCAT CACAAGGATT CACCCACCTG GGACCAACCC TTCTCTTTGC CCTGACTGCA CCTGCGTCAA TGATCGGTCT GTCATTGGGT ATGCTGCGCA TCCCTGTGGG AACTGCCTAC GCCGTGTGGA CAGGACTTGG CGCAGTCCTC ACCGTCGGTT ACGCCGTAAC AACCGGCACC GAACTACTGA CCACGGCAAA AATCCTCGCG CTAGCCCTCA TTGTGGGGTG CACCATCGGA CTAAAAGCCA CCCACCCACA CCCACCAGAA CCACAACTCA CAAGCACACC ACCTACCCCA TAG
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Protein sequence | MTTTPTPRRV ITHVREHLTD NAAWAVLLLS AALEATWATA LGASQGFTHL GPTLLFALTA PASMIGLSLG MLRIPVGTAY AVWTGLGAVL TVGYAVTTGT ELLTTAKILA LALIVGCTIG LKATHPHPPE PQLTSTPPTP
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