Gene Jden_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1175 
Symbol 
ID8380352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1249740 
End bp1250162 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content59% 
IMG OID645003920 
Productsmall multidrug resistance protein 
Protein accessionYP_003161134 
Protein GI256832407 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0300462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTA CCCCTACCCC ACGCCGTGTC ATCACCCACG TTCGTGAACA CCTCACCGAC 
AACGCAGCCT GGGCGGTTCT CCTGCTTTCT GCAGCCCTCG AAGCGACCTG GGCTACTGCA
CTGGGCGCAT CACAAGGATT CACCCACCTG GGACCAACCC TTCTCTTTGC CCTGACTGCA
CCTGCGTCAA TGATCGGTCT GTCATTGGGT ATGCTGCGCA TCCCTGTGGG AACTGCCTAC
GCCGTGTGGA CAGGACTTGG CGCAGTCCTC ACCGTCGGTT ACGCCGTAAC AACCGGCACC
GAACTACTGA CCACGGCAAA AATCCTCGCG CTAGCCCTCA TTGTGGGGTG CACCATCGGA
CTAAAAGCCA CCCACCCACA CCCACCAGAA CCACAACTCA CAAGCACACC ACCTACCCCA
TAG
 
Protein sequence
MTTTPTPRRV ITHVREHLTD NAAWAVLLLS AALEATWATA LGASQGFTHL GPTLLFALTA 
PASMIGLSLG MLRIPVGTAY AVWTGLGAVL TVGYAVTTGT ELLTTAKILA LALIVGCTIG
LKATHPHPPE PQLTSTPPTP