| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1170 |
|---|
| Symbol | |
|---|
| ID | 8380347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 1244860 |
|---|
| End bp | 1245441 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645003915 |
|---|
| Product | protein of unknown function DUF461 |
|---|
| Protein accession | YP_003161129 |
|---|
| Protein GI | 256832402 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2847] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.292974 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTTC CCCTCTTTTC CCATGCCCAC ACACCAGTTC GCCCCACACT CACCATCGCT
GCCCTTGGTG CAGCCCTGCT TTTGGGTGGG TGTACCGCAT CAGAAACCGC GCCACCCACA
ACCTCACTCA CACAGGAAAC AAGCACTCAC AGTGCATCAG ATCTCCTCAC CATTGAGTCC
GCCTGGGTGA AAGCCGGAAC CCAAGGAACA ATGACCGGTC TGTTTTTGTC CCTCACCAAT
ACCGGCGACA CCGCGTTGAC CCTGACCAGT GCACACAGCG ACAGTGCCAC CATGATGGAG
TTACACGACA CCGTCGCGGC AGACGACGGA TCAACCACCA TGGTCGAAGT AGATGGTGGG
TTCACCATCG CACCAGGTGA CACGATGATC CTTGAACCAG GTGGGCGCCA CCTCATGCTC
ATGGGGCTAA CCAACGACCT CATCGCTGGA GACACCCTTG ATGTCACCCT CACGTTCAAC
GACGGTTCCT CCACCACCAT CAACGCCCCG ATCCGCGAGG TTGATGGCGC CCAAGAAACG
TACGAACACC AAGAAACCGA CATGAGTGGC CATGACAAGT GA
|
|---|
| Protein sequence | MPFPLFSHAH TPVRPTLTIA ALGAALLLGG CTASETAPPT TSLTQETSTH SASDLLTIES
AWVKAGTQGT MTGLFLSLTN TGDTALTLTS AHSDSATMME LHDTVAADDG STTMVEVDGG
FTIAPGDTMI LEPGGRHLML MGLTNDLIAG DTLDVTLTFN DGSSTTINAP IREVDGAQET
YEHQETDMSG HDK
|
|---|
| |