Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1157 |
Symbol | |
ID | 8380334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 1235470 |
End bp | 1236141 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645003902 |
Product | cobalt transport protein |
Protein accession | YP_003161116 |
Protein GI | 256832389 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.930884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACAC CACGCCGAGT TCCCCGCCAT CAACGACTTG ATGCTGCGCC TGTACTTGTG GGCACCTACA GCCCCGGAAC CAGTGTCATT CATCGTCTCC CCGCAGGAGC CAAAATCTTC GTGGTGATTG GGTTCAGTCT GGTCGTGGGT TGTGTACGTA CGGTTCCCAT TGCCATCGGC GCGCTGGTTG TGGCCATCAT CTTGTGGGCC AGTGCCGCAC TGTCCTGGCG GACGCTCATG GGTTTATGGC CACTTGTGTT CGTTGTTGGT CCCATGGCCG GGTATCACGT GTGGCGAGGC AACCCAATGT TGGCGTTCAT GATGCCTGCT GGTTTGATCG GTGTTGTCAT GGTGGCAACT GTCGTGTCAC GCACCACCAG CACAACCGAC ATCACTGACC TGGTGACCCG CGCATCGGCA CGCGTCATTG GAGTTCGCGC CGCCACAATC GTCGCACTGA CCATCTCATT GACACTTCGG ATGATCCCTG TGCTGTTGGA GCTCATTGCA CAAACCCGCA GTGCAGTGAC AGCACGCGGC GCTACCCCAA CACCTTCTCG GGTATTCCTC CCTGTCGTGT TGCGGGCAAC AAAGTTCGCG CTCGACACTG CAGACGCACT TGATGCTCGT GGTGCACTAG ATGAGGACGA CCCATCACCG ATGTGCCGGT GA
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Protein sequence | MTTPRRVPRH QRLDAAPVLV GTYSPGTSVI HRLPAGAKIF VVIGFSLVVG CVRTVPIAIG ALVVAIILWA SAALSWRTLM GLWPLVFVVG PMAGYHVWRG NPMLAFMMPA GLIGVVMVAT VVSRTTSTTD ITDLVTRASA RVIGVRAATI VALTISLTLR MIPVLLELIA QTRSAVTARG ATPTPSRVFL PVVLRATKFA LDTADALDAR GALDEDDPSP MCR
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