| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1134 |
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| Symbol | |
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| ID | 8380311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1214024 |
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| End bp | 1216552 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645003879 |
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| Product | glycoside hydrolase family 48 |
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| Protein accession | YP_003161093 |
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| Protein GI | 256832366 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAGAA CGACACAGCG CAGAACACCG TGGGCGTGGC TCGCGGCTAT CGGCGCATCG
TCGCTTCTCG CAGGGTTCGC CATACAACCT GCGACCGCGA CGACAACCAC ACCACCCGTG
CGCGACACCG TGGTGACACA AGACGCGCTC ACTGAGTATG ACCAGCGATT CCTCGAACTG
TATGAGGACA TTCACAACCC CGACAACGGC TACTTCAGCC CCCAAGGGAT CCCCTACCAC
GCTGTGGAAA CGCTCATGGT CGAGGCACCC GACTATGGGC ACGAAACAAC CTCAGAAGCA
TACAGCTTCT GGATCTGGCT TGAAGCAGTC TACGGGCGTG TCACAGGGGA CTGGGAACCC
CTCAACCACG CGTGGGAAAC CATGGAAACC TACATGATCC CACAATCCGA AGATCAACCC
ACCAACTCCT TCTACAACCC CAACTCACCG GCTACCTACG CCGCCGAGTA CAACCACCCA
TCCCAATACC CCAGCGAACT CAACTCTGGG GTGTCCTCAG GCCGTGACCC AATTGGCGCC
GAACTCCGCC AAACCTACGG AACCTCAGAC ATCTACGGGA TGCACTGGCT CGCTGATGTC
GACAACATCT ACGGATACGG GGCAGCCCCA GGACCAGGCT GCACACTTGG GCCAGACTAC
GAAGGTGTCT CCTACATCAA CACCTTCCAA CGTGGACCTC AAGAATCCGT GTGGGAAACC
ATTCCACAAC CCAGCTGTGA AGAATTCGAG TTCGGTGGAC CAAACGGGTA CCTAGACCTG
TTCACCAAAG ACTCCAACTA CGCCAAACAG TGGAAGTACA CCAACGCGCC AGACGCAGAT
GCCCGCGCCA TCGACGGAAT CTACTGGGCC AAAAAGTGGG CCGAAGAACA AGGCAAAGGC
AACGAGATTG CTGCCACCGT TGACAAAGCG TCCAAAATGG GTGACTACCT GCGCTACGCC
ATGTTTGATA AGTACTTCAA AGAAGTAGGG TGTAACTCCC CATCATGTAC CGCAGCCCAA
AACCGCGAAT CCGCGCACTA CCTGCTCTCC TGGTATTACG CCTGGGGCGG TGCAACCGAC
TCCAACGCCG GATGGGCATG GCGCATTGGC TCCTCCCACG CACACTTTGG CTACCAAAAC
CCAATGGCCG CATGGGTTCT GTCCACAGAC GCCGACCTCA TCCCACAATC ACCCACTGCG
CAAGACGACT GGGCGAAATC CATGGACCGC CAACTCGAAT TTTACCAATG GCTCCAATCA
GCCGACGGTG GAATCGCTGG TGGGGCAACA AACTCATGGG ATGGCGCCTA CGCAGCCAAA
CCAGCAGGCA CCCCAACCTT CTACGGAATG GGATACACCG AAGCACCCGT TTACCACGAC
CCACCCTCAA ACGAGTGGTT CGGCATGCAA GTATGGTCAC TCGAACGAGT CGCCCAACTC
CTGCACGAAA CAGACGACCC ACGAGCCAAA AAAATCCTCG ACAAGTGGGT TCCTTGGGCA
CTAGAAAACA CCAACTTCAC CGATGACGAG AACTGGTCCA TTCCATCCAA CCTCGCATGG
TCCGGGAAAC CAGACACCTG GAATCCCAGT AACCCGGGAA ATAACGCTGG CCTCACCGTC
ACCGTCTCCG GCCACGGCCA AGACGTCGGA GTCGCAGCAG CCTACGCACG CACCCTCATG
TACTACGCCG CAGCCACCGG AGACGACGCA GCACAAGAAG GCGCACGCAA ACTCCTTGAC
TACATGTGGG AATACCACCG AGACGACATC GGTGTCTCAA CCACCGAAAA ACGAGGCGAT
TACAAACGCT TTGACGACGT CTACACCGCA GGCGGTGACG GAACCTACGT GCCACCAGGG
TGGAGCGGCA CCATGCCCAA CGGTGACGTC ATCGAACCAG GAGTATCATT CCTCGACATC
CGTTCGTTCT ACCTCGACGA CCCAGACTGG CCCAAAGTCC AGGCCTACCT TGACGGTGGA
GAAGAACCAG AATTTAACTA CCACCGATTC TGGGCACAAA CCGCGATCGC TACAGCGCTC
GCAGACTACG AGCACTTGTT CAATGACGCA GATCCTGATC CTGAGCCAAC GGACCCGGAC
CCAGAGCCCA CTGATCCTAC TGATCCGGAC CCTGACCCAA CCGACCCGGA CCCAGAACCC
ACCGATCCTA CCGATCCGGA CCCAGAACCC ACTGACCCAA CCGACCCAGG TGAAGGTGGC
ACATGCGATG TCACTTACAC CACCAACGAC TGGAACAGTG GTTTCACCGC AACAGTGAAG
ATCACGAACA CCTCCACCCA ACCCATTAAC GGCTGGAGCC TGGCGTTCAC CTTCCCTGCC
GGTCAACAGA TCACCAACCT GTGGTCCGCA ACCAACACAT CAACAGGTTC CACAGCAACC
ATCACCAACG CTGCCTGGAA CCCCACCATT AACGCAGGAC AAACCGTGGA GTTCGGCTTC
AACGGAACCC ACAACGGGAA CAACCCCGCA CCCACCAGCT TCACACTGAA CGGCGCAACC
TGTTCCTAA
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| Protein sequence | MARTTQRRTP WAWLAAIGAS SLLAGFAIQP ATATTTTPPV RDTVVTQDAL TEYDQRFLEL
YEDIHNPDNG YFSPQGIPYH AVETLMVEAP DYGHETTSEA YSFWIWLEAV YGRVTGDWEP
LNHAWETMET YMIPQSEDQP TNSFYNPNSP ATYAAEYNHP SQYPSELNSG VSSGRDPIGA
ELRQTYGTSD IYGMHWLADV DNIYGYGAAP GPGCTLGPDY EGVSYINTFQ RGPQESVWET
IPQPSCEEFE FGGPNGYLDL FTKDSNYAKQ WKYTNAPDAD ARAIDGIYWA KKWAEEQGKG
NEIAATVDKA SKMGDYLRYA MFDKYFKEVG CNSPSCTAAQ NRESAHYLLS WYYAWGGATD
SNAGWAWRIG SSHAHFGYQN PMAAWVLSTD ADLIPQSPTA QDDWAKSMDR QLEFYQWLQS
ADGGIAGGAT NSWDGAYAAK PAGTPTFYGM GYTEAPVYHD PPSNEWFGMQ VWSLERVAQL
LHETDDPRAK KILDKWVPWA LENTNFTDDE NWSIPSNLAW SGKPDTWNPS NPGNNAGLTV
TVSGHGQDVG VAAAYARTLM YYAAATGDDA AQEGARKLLD YMWEYHRDDI GVSTTEKRGD
YKRFDDVYTA GGDGTYVPPG WSGTMPNGDV IEPGVSFLDI RSFYLDDPDW PKVQAYLDGG
EEPEFNYHRF WAQTAIATAL ADYEHLFNDA DPDPEPTDPD PEPTDPTDPD PDPTDPDPEP
TDPTDPDPEP TDPTDPGEGG TCDVTYTTND WNSGFTATVK ITNTSTQPIN GWSLAFTFPA
GQQITNLWSA TNTSTGSTAT ITNAAWNPTI NAGQTVEFGF NGTHNGNNPA PTSFTLNGAT
CS
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