Gene Jden_1130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1130 
Symbol 
ID8380307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1208584 
End bp1210200 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content59% 
IMG OID645003875 
Productvirulence factor MVIN family protein 
Protein accessionYP_003161089 
Protein GI256832362 
COG category[R] General function prediction only 
COG ID[COG0728] Uncharacterized membrane protein, putative virulence factor 
TIGRFAM ID[TIGR01695] integral membrane protein MviN 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGGTG ATTTCCGCTC CCGCCTGAGT ACCCTTGCGG GGGCTGCTGT TCTGATTTCT 
GCCGTGACGT TAGCGTCGCG CGTCTTGGGG TTTGGCCGGT GGATTGCTCA AGCGTCCTGG
GTGGGGACGG GGGGAGTGGC CGAAGCCTAT GCTGCAGCCA ACCTCCTTCC TAATGTGCTT
TTCGAAGTTG TTGCGGGGGG CGCGTTAGCA AGTGCTGTGA TTCCGCTGTT AACAGGCGCA
GTTTCTCAGG ATCGTCAAGA CAAGGTTCGT GACTCTGCGT CGGCGTTGAT GACGTGGACC
TTGATTGTGT TAGTTCCACT GGCACTTGTT GTTGTTGTGG GGGCGCGTCC GATCCTGTCG
GTGGCCTCTG GGCTCGTGGG CACGGAGTGG GAAGACACGG CAGTCTTTTT TCTTCGTGCT
TTCGCGGCGC AAATTCCGTT GTATGGGGTA GGGATTGTTG CGGGAGGTGT GCTTCAGGCA
CATCGCCGGT TTTTTTGGCC AGCATTTGCT CCGCTGGTGT CGTCCCTGGT TGTCATGGTT
GTGTACTTTG CGTTTGATCG GCTAGCGCAG GGCAGTCACA CAGATCCGCT TGCGTTGTCG
ACGTTGTCGC TGGGGGTGCT GGCGTGGGGG ACAACTGCTG GGGTGGCTGC GATGGCACTG
ACAATGGTGG CCCCCATGTT GGCGTTGGGT ATCTGGCCTC GGTTGCGGGT GTCGTTTCCT
GATGGTCAGG CGGCGCGGGC GCGTTCTCTT GCGGGCGCCG GGTTGGGCGC TCTTGTTGCC
CAGCAAGTAA CCACCGTGGT GGTGATGAGG CTTGCGACCA CTGTGGGTGA CCCGACGTCA
CTGAACGTAT TTCAGTATGG TCAGGCCGTG TATTTTTTGC CGTATGCGGT TCTCGTCGTG
CCGCTGGCAA CTAGTGCGTT CCCGCGATTG TCTGCGCTTG CCCAGAGTGG TGATGATGTG
GGATTGGGGT TACTCGTCTC GTCAACATCG CGTCTTGTTG TGGTGATTTG TGGGGTAGGG
GCAGCGGTGT TAGTGGCGGC GAGTTGGGCG GTCGAGGTGT TCTTCGAATC GTTTACTCGT
GGTGGTGTTC CTGGAATGGG AGCCTTGTTA CTCAGTCTTG CACCGAGCGT GCTTGGTCTT
GCCGCTATTT ATCATCTGTC TCGTGTGTTG TATGCCCGTG ATAACGGGCG TGCTGCGGTG
ATCGCGACTG CGTCTGGGTG GGCATTGGTG TCGTTGTGCA TGATCGCGGG GGTGATGCTG
CTTCCCGAGG CCCGCACAGC AGCACAGTTT CTCGTGATTG TGGGCCTGTC ACACACTCTT
GGTTTGACTA TCGCCGCTGT GCTTCTTGTT GTTGCTGTGA TCCGTGATTG TGGGCGCCGC
GCACTCAGTG GTGTTGGGCG TTCTGTAGCG GCTTCTGGGG TGGGGGCAGT GGTCGGTGGG
ATAGCTGGGC GGTCTTTGAG CAGCGTGTTG TTGGAGCCTG GTGCATCAAC GTGGATGGCG
GTGGGTGTCG GGGCGCTTGG TGCTTCGGTG GCGTTGGTGT GTGTCCTTGT GAGTGTGGCT
GTCATTGATC GTGGTGATGT GCGTCGGTTG ATTCGAGGGC GGGGGAGGGT GTTGTGA
 
Protein sequence
MKGDFRSRLS TLAGAAVLIS AVTLASRVLG FGRWIAQASW VGTGGVAEAY AAANLLPNVL 
FEVVAGGALA SAVIPLLTGA VSQDRQDKVR DSASALMTWT LIVLVPLALV VVVGARPILS
VASGLVGTEW EDTAVFFLRA FAAQIPLYGV GIVAGGVLQA HRRFFWPAFA PLVSSLVVMV
VYFAFDRLAQ GSHTDPLALS TLSLGVLAWG TTAGVAAMAL TMVAPMLALG IWPRLRVSFP
DGQAARARSL AGAGLGALVA QQVTTVVVMR LATTVGDPTS LNVFQYGQAV YFLPYAVLVV
PLATSAFPRL SALAQSGDDV GLGLLVSSTS RLVVVICGVG AAVLVAASWA VEVFFESFTR
GGVPGMGALL LSLAPSVLGL AAIYHLSRVL YARDNGRAAV IATASGWALV SLCMIAGVML
LPEARTAAQF LVIVGLSHTL GLTIAAVLLV VAVIRDCGRR ALSGVGRSVA ASGVGAVVGG
IAGRSLSSVL LEPGASTWMA VGVGALGASV ALVCVLVSVA VIDRGDVRRL IRGRGRVL