| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1118 |
|---|
| Symbol | |
|---|
| ID | 8380295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 1189310 |
|---|
| End bp | 1190734 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645003859 |
|---|
| Product | argininosuccinate lyase |
|---|
| Protein accession | YP_003161077 |
|---|
| Protein GI | 256832350 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0165] Argininosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.542068 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACG AACACTCGAC GGACCGTCTG GCCCTGTGGG GCGGACGGTT CGCCGGGGGG
CCCTCACCGG CCCTCGCCGC ACTGTCGAAG TCGACACACT TCGACTTCGA ACTAGCACCG
TATGACATCG CTGGTTCTCA AGCCCACGCC ACAGCGTTAC ACGCTGCCGG GTTACTCACA
GACGACGAAC ACGAGTCCAT GCTCGAGGCA CTCAACACAC TGGCCGATGA TGTTGCTTCA
GGTCGTTTCG TTGCAGAAGA CCACGACGAA GATGTCCACA CAGCGCTTGA ACGCGGGCTC
ATTGAACGCG CCGGAGCTGA ACTCGGAGGC AAACTTCGAG CCGGACGTTC CCGCAACGAC
CAAATCGCAA CCCTTGTGCG CCTGTACTTG CGCGACCACG CGAAAACGAT CGCCGGGATG
GTCCTTGACC TCGTCGATGC GCTCATTGGA CAAGCACAAC GCCACCCTCG TGCGCCCATG
CCTGGGCGCA CGCACCTCCA ACACGCACAA CCTGTGTTGT TGTCCCACCA TCTCCTGGCT
TATGCGTGGC CGTTGTTGCG TGATGTTGAT CGGTTCATCG ACTGGGATGT TCGTGCGTCA
CGGTCCCCTT ATGGGTCTGG GGCGCTCGCT GGTTCTTCGC TTGGTTTGGA CCCACAACTT
GTTGCTCAGC ATCTTGGTTT TGATGGTGTT GTCGAGAACT CCCTCGATGG GACAGCCTCA
CGTGACGTGG TCGCTGAGTT TGCCTTTATT TCCGCCATGA TTGCCGTGAA TCTCTCGCGG
CTGTCCGAGG ACATCGTTAT CTGGAACACC AAAGAGTTCG GGTTTGTCAC GTTGGACGAC
GGGTATTCCA CGGGTTCTTC GATCATGCCG CAAAAAAAGA ACCCTGACAT CGCTGAACTT
GCCCGCGGTA AGGCTGGGCG TGTGATTGGT GATCTCACTG GGCTGCTGAC GACGCTCAAA
GGGTTACCGT TGGCGTACAA CCGGGACTTA CAGGAAGACA AAGAACCAGT GTTTGATCAG
GTGAACACGC TGGAAGTTGT CCTGCCTGCG TTTGCGGGAA TGGTCGCCAC GCTGACTTTT
CACACTGATC GCATGGCAGC GCACGCGCCC CAGGGGTTCT CACTGGCTAC TGACATCGCA
GAATGGTTGG TCCGGCAGGA AGTGCCTTTC CGTGTCGCCC ATGAAGTCGC CGGTGAATGC
GTGCAAGTAT GCGAAACTCG TGGCATCGAG CTGTGGGACT TGAGCGACGA CGATCTCGCG
CAGATTTCAC CGCACTTAAC CCCACAGGTG CGTGATGTGC TTACTGTGGA CGGGTCGATT
GCCTCGCGTT CTGGCGCGGG CGGAACCGCG CCGAGTAGGG TCGCTGAACA ACTTGATCAC
GCCAGTGAGC GTGTCGCTGA GTTCCGTTTC TGGGCTAACG GGTAG
|
|---|
| Protein sequence | MTNEHSTDRL ALWGGRFAGG PSPALAALSK STHFDFELAP YDIAGSQAHA TALHAAGLLT
DDEHESMLEA LNTLADDVAS GRFVAEDHDE DVHTALERGL IERAGAELGG KLRAGRSRND
QIATLVRLYL RDHAKTIAGM VLDLVDALIG QAQRHPRAPM PGRTHLQHAQ PVLLSHHLLA
YAWPLLRDVD RFIDWDVRAS RSPYGSGALA GSSLGLDPQL VAQHLGFDGV VENSLDGTAS
RDVVAEFAFI SAMIAVNLSR LSEDIVIWNT KEFGFVTLDD GYSTGSSIMP QKKNPDIAEL
ARGKAGRVIG DLTGLLTTLK GLPLAYNRDL QEDKEPVFDQ VNTLEVVLPA FAGMVATLTF
HTDRMAAHAP QGFSLATDIA EWLVRQEVPF RVAHEVAGEC VQVCETRGIE LWDLSDDDLA
QISPHLTPQV RDVLTVDGSI ASRSGAGGTA PSRVAEQLDH ASERVAEFRF WANG
|
|---|
| |