| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1061 |
|---|
| Symbol | |
|---|
| ID | 8380238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 1131104 |
|---|
| End bp | 1132009 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645003802 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003161020 |
|---|
| Protein GI | 256832293 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0421] Spermidine synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCTC GTCGTTCTCG TCCGTCTCGC CGTCCTCAGG TGGCGCTGCC CACCGATCCG
ATCCGCACTG CATATCAGAC CGTTCGCGTA GCAGCAGATC GAGACCATGA CCGGCGCCTG
ACGCTTTTCC TTGATGACAC ACCTAGTTCA TTTATTGACC TAGACGATCC GCTCCATGTG
GGGTTTGAGT ATCTCGATAT CATGCATCGG GTCATTGTTG ACCTTGCGCC AACTTCACGG
AAGATTGCAC ATCTCGGTGT CGCGGGTGCG AGTCTTGCGC GCGCATGCGC TGCTTCTATT
CCAGCTGTTG AGCAAATCGG GATTGACATT GATGGTGAGT TGTTGGAGTT AGTGCGCAGA
TGGTTCGATC TGCCCCGTTC TCCTGCGCTG AAGTTAAGGC CGGGTGATGC GCTGGAGCAG
GTGGTGTCGT TGCGTTCCGG GAGTATCGAT GTACTGACGC GCGATATTTT CACGGCCGGG
GTGATTCCCG AGCATGTGGT GTCCTCGACG ATGGCTGGCG AGGTGATGAG AGTTCTTCGA
CCTGGCGGCT TGTATCTCGT CAATAGTGCC GACCGACAAC CATTAACGCT GGTCAAACGC
GAGTTGGCGA CATTGGCGCA CAGTATTGCC CAGACACACC AGCTCAACGC ATCTGAGGTC
AGTTCCTCGT GGGATCCCTG GGATTATCTC GCGCTCATTG CCGAACCCTC AATAGTGAAA
AAGAAGCGTT ACGGCAATGT TGTTCTGTGT GCAGTTCGAC CAGACGCCGA GAACCCCATG
AGCCCTTTTG AGACCAGCGA GACGCTGTAC CGGTCGTTGA GGTCCATGGC AGTCCCGGCG
AGTATCTTGC ACGGGGAACA GATTCAGCAC TTTGTTGCTG ATGCACAACC TTTTGGGCCT
AGTTGA
|
|---|
| Protein sequence | MASRRSRPSR RPQVALPTDP IRTAYQTVRV AADRDHDRRL TLFLDDTPSS FIDLDDPLHV
GFEYLDIMHR VIVDLAPTSR KIAHLGVAGA SLARACAASI PAVEQIGIDI DGELLELVRR
WFDLPRSPAL KLRPGDALEQ VVSLRSGSID VLTRDIFTAG VIPEHVVSST MAGEVMRVLR
PGGLYLVNSA DRQPLTLVKR ELATLAHSIA QTHQLNASEV SSSWDPWDYL ALIAEPSIVK
KKRYGNVVLC AVRPDAENPM SPFETSETLY RSLRSMAVPA SILHGEQIQH FVADAQPFGP
S
|
|---|
| |