| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1052 |
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| Symbol | |
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| ID | 8380229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1120255 |
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| End bp | 1122264 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645003793 |
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| Product | helicase c2 |
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| Protein accession | YP_003161011 |
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| Protein GI | 256832284 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.325194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTCCTC CCGCAACCGC TTCCGCTACG GTGAACTCGT TACTTGACAT TGTTGTGACG
AGCCTCGGTG GGGCGCCGCG ACGTGGGCAG CAAGACATGA CTTCCGCCGT GTTTGATGCA
ATGGAAGGTC ATCATCCGCT GATTGTGCAA GCGGGTACCG GGACGGGGAA GTCCATGGCT
TACCTTGTTC CGGCTGTCGC GCACGCCGTT GCAACTAACG AACGTGTGAT TGTTGCGACC
GCCACACTAG CGTTGCAACG TCAGATCATG ACTCGTGACT TGCCTTTGCT TTCTCAGGCG
CTCCAACCGC ATCTCGATCG GCAACCAGAT GTGGCGTTGC TGAAAGGGTG GAGCAACTAT
GTGTGCCTCC ACAAGGCACA GGGGGGGTAC CCGCAGGAGG AGGCCACACT TTTTGCGCCG
GACGATCCCG TTCCGGCTGC AGGGACAAGC ACGGCAGATC ACCCCGATAC CGCTGAGGTG
GAGTCCCTGG CTGACCAGAT GCGACGCATT GTCACCTGGG CCCGAGACAC CGACACCGGG
GATCGCGACG ACTTAGTTCC GGGTGTCTCT GATCGTGCGT GGCGTGCGAT GTCCGTGGAC
AAGCTGGAGT GCATTGGTTC ATCGTGCCCG TTGATCCATG AGTGTTTTCC CGATAACGCC
AGGAAAACTG CGTTTGATGC TGACCTTGTC GTCACGAACC ACACGATGTT GGGAATTGCC
GCCTCTGGTT CAGCGGGTGT GTTGCCAGAA CATGACGTCA TTATTGTCGA TGAGGCACAC
GAACTTGCTG ATCGTGTGAC GTCGGCTGCG ACTGTTGATC TTTCTGCGGG GTCCATCGAC
AAGGCGGCGC GTCTTGCTCG CCGCCGTGGC GGACGTGTGA CAGATGCGCT TGATGACGCC
AGCGCCCAGT TAGCGCTCGC CCTGATTAAT CAGCCGGACC AGACGTTCAC CGGTGGCTTG
CCCGCTGAGC TTCACGATGC GGTCAGTGCT GTGCGTGACG CCTCCCGGCT GTTGGTGTCT
GAGTTGAAAC CGGAAAAGAA GGACGACACC GCTGATGCAG GGTTAAAACA AGCGCAGGCT
GCTGTTCTGT CGATCTTTGA GATCGCGGAA CGAATGACGG CTGAGGACAC ATCCGCCGAC
GTGCTGTGGT GCGCCAGGCC GCGGATTGGT TCTGATACGG CGCCCCCTCG TCTGTATGCT
GCCCCATTGA GTGTGTCGTC GTTGTTGGCT CAAGCGCTGT GGCCGGAGCA TACTGCGATC
CTCACCTCAG CAACGTTGGC TATCGGTGGG AACTTTGATT CGGCAGCTCG AACCGTGGGG
TTGGCTGGGG TGGACGACCT TGTCACCAAG GATGTCGCGT CACCTTTTGA CTATCCGCGT
CAGGGAATTT TGTATCTTGC TCGCGATTTA CCTGTTCCTG GATCAAGCCC AACAACTGAT
GACCAGCTCG CCCATATTGA GGAGCTCATC AACGCTGCGC ATGGGCGGAC ATTGGGCCTT
TTCTCCTCGC GAAAAGCTGC GCAGCGAGCC GCAGAAGTTC TCAAAGAACG CGTGAGTTAC
CCGATTTTGC TCCAAGGAGA GGACCAGTTG CCCACACTTG TGCGGCTGTT CCGTGAAGAC
CCCCAGACAT GTCTTTTTGG GACTTTGTCG TTGTGGCAGG GTGTTGATGT CCCAGGGGAC
GCATGTCAGC TTGTTGTGAT CGATCGGATT CCGTTTCCTC GACCAGATGA CCCCGTTCGT
TCGGCGCGCA CGAAAGCAGT GGCACAATCA GGGGGGAATG GTTTCATGAC AGTGGCTGCT
CATCATGCTG CGCTTCTCCT CGCGCAAGGA GCCGGACGGT TGATTCGGTC AACTGATGAT
AAGGGTGTTG TGGCCATCTT GGACCCACGG ATTGCCACAG CGCGATACGG CCAGTACCTT
CTATCTGCTC TGCCTCCGAT GTGGCGAACC ACGCAGAAAG CTACCGCAGT CTCAGCTCTT
CACCGTTTAA CCTCTCGCAG CGGTGACTAA
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| Protein sequence | MTPPATASAT VNSLLDIVVT SLGGAPRRGQ QDMTSAVFDA MEGHHPLIVQ AGTGTGKSMA
YLVPAVAHAV ATNERVIVAT ATLALQRQIM TRDLPLLSQA LQPHLDRQPD VALLKGWSNY
VCLHKAQGGY PQEEATLFAP DDPVPAAGTS TADHPDTAEV ESLADQMRRI VTWARDTDTG
DRDDLVPGVS DRAWRAMSVD KLECIGSSCP LIHECFPDNA RKTAFDADLV VTNHTMLGIA
ASGSAGVLPE HDVIIVDEAH ELADRVTSAA TVDLSAGSID KAARLARRRG GRVTDALDDA
SAQLALALIN QPDQTFTGGL PAELHDAVSA VRDASRLLVS ELKPEKKDDT ADAGLKQAQA
AVLSIFEIAE RMTAEDTSAD VLWCARPRIG SDTAPPRLYA APLSVSSLLA QALWPEHTAI
LTSATLAIGG NFDSAARTVG LAGVDDLVTK DVASPFDYPR QGILYLARDL PVPGSSPTTD
DQLAHIEELI NAAHGRTLGL FSSRKAAQRA AEVLKERVSY PILLQGEDQL PTLVRLFRED
PQTCLFGTLS LWQGVDVPGD ACQLVVIDRI PFPRPDDPVR SARTKAVAQS GGNGFMTVAA
HHAALLLAQG AGRLIRSTDD KGVVAILDPR IATARYGQYL LSALPPMWRT TQKATAVSAL
HRLTSRSGD
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