Gene Jden_1026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1026 
Symbol 
ID8380203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1090747 
End bp1092066 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content57% 
IMG OID645003767 
Productprocessing peptidase 
Protein accessionYP_003160985 
Protein GI256832258 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGTGGT CACTTCCACT CGAACACGCA GGACACCCAG ATAACACACT CAACGCTGGG 
CAGGATGGAA CGCTCATTCG GCGTTCCGTT CTGCCCGGCG GGGTGCGCGT CATCACGGAA
CAGATGCCAG GGCAGCGGTC CGTGACAGTC GGCGCCTGGT TTAATGTGGG GTCGCGTGAT
GAAGCAGACG GACATTATGG TTCCACTCAT TTCCTTGAAC ATCTTCTGTT TAAAGGAACA
CCACGGCGCA CCGCATTCGA TATTGCCGGC GCTTTCGATT CAGTGGGTGG CGAAGCAAAT
GCTGTGACTG GCAAAGAAAA CACGTGTTAC TACGCCCGAG TGTTGGACAC GGACCTTCCG
ATGGCGGTCG ATGTGATCCT CGATATGGTG ACGTCTGCCA GCCTTGACGC GCATGAACTG
GAAATTGAGC GCGGGGTCAT CCTCGAAGAA CTTGCCATGA ATGATGACGA TCCCGGTGAT
GTCATCCATG AGCATTTCAC CTCTCATGTT CTCGGCGACC ACCCATTGGG GCGCCCGATT
GGTGGAACAG CGCACACGAT CACTGCCGTA CCCCGGGAGG CCGTCTGGGC GCATTACCGT
GCGCACTATG TTCCAGAGGG GCTCGTCGTG ACGGCTGCAG GATCTGTTGA CCATGATGTG
CTTTGTGACA TGGTGCTTGA GGCGTTGGAC CGTGGCGGGT GGGATCTCGC GTCCGCTGCA
ACACCTTTAC CGCGTCGATC AGCGTCACCG CTAGATGTTC CGTTGAGCGA ACACAGAGTT
GACATTCCTC GTGCTACGGA ACAAGCGCAT GTCATTGTGG GGTGTCAGGG GTTGAGTGCT
GCTGATGAGC GCCGCTTTGA CATGTCGGTC CTCACTGCAG CGCTTGGGGG CGGTATGTCC
TCACGCATAT TCCAAGAAAT TCGTGAAAAG CGCGGCTTGG CCTATTCGAC CTATTGTTTC
GGTTCCAGCT ACAGCGGGAT CGGAACATTT GGCCTGTATG CAGGGTGCGC GCCAGCCCGA
GTGCGCGACG TGGAATCGCT CATGGTTGCG GAACTCGAGA AGCTTGCCGC ACACGGATTG
ACTCACGAGG AGATGGTTCG GACTCAAGGG CAACTGCGCG GGTCGTTGGT CTTGGGCGTC
GAGGACTCCG GCGCCCGAAT GAACCGTCTT GGACGGGCAG AATTGGTCAC GGGTGAGTTG
TATTCACTTG ATGAGTCGAT CCACAAAATC AATGCTGTCA CTGCTGAGCG GGTGCAGTCT
CTTGCCCAGG AACTCGCAAG GCGTGTTCGG GTGACTGCGA CCATAGGATT GCAGGAATAA
 
Protein sequence
MVWSLPLEHA GHPDNTLNAG QDGTLIRRSV LPGGVRVITE QMPGQRSVTV GAWFNVGSRD 
EADGHYGSTH FLEHLLFKGT PRRTAFDIAG AFDSVGGEAN AVTGKENTCY YARVLDTDLP
MAVDVILDMV TSASLDAHEL EIERGVILEE LAMNDDDPGD VIHEHFTSHV LGDHPLGRPI
GGTAHTITAV PREAVWAHYR AHYVPEGLVV TAAGSVDHDV LCDMVLEALD RGGWDLASAA
TPLPRRSASP LDVPLSEHRV DIPRATEQAH VIVGCQGLSA ADERRFDMSV LTAALGGGMS
SRIFQEIREK RGLAYSTYCF GSSYSGIGTF GLYAGCAPAR VRDVESLMVA ELEKLAAHGL
THEEMVRTQG QLRGSLVLGV EDSGARMNRL GRAELVTGEL YSLDESIHKI NAVTAERVQS
LAQELARRVR VTATIGLQE