| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1019 |
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| Symbol | |
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| ID | 8380196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1080345 |
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| End bp | 1083359 |
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| Gene Length | 3015 bp |
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| Protein Length | 1004 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645003760 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_003160978 |
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| Protein GI | 256832251 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAAAA TCCGCGTCTA CGAGCTCGCA AAGGAGCTCG GGGTGGAAAG CAAGACAGTA
ATGAGTAAGC TCAACGAACT CGGAGAGTTC GTGCGGTCAG CTTCCTCAAC CATTGAAGCG
CCAGTAGCGC GCCGCTTGCG GGACTCCTTC CCTCAATCGG GCAGTGCCGC GCCTTCCGAA
CAAACACCGC GAAAAGCGGC ACCTAAACCA GGTGCGCGCC CCGCAAAACC AGCCCCACGT
GCAGCAAAAG AACCACAGGG CGACAGCACC CCCTCGACAC CGCCCACCAC AACGGCACCG
GTTGAGGCAA AACCAACAAC ACTGCCTGCA CCCAGTGCGA GCGCATCGGC AAACACTGCC
CCCAGCAAGC CAGCAGCCGC TGCAGCTGAG ACAACCGCGC CCAGTGAACG ACCTGCCGAA
ACAACCCCTG AGCGTTCCGA AGCACCTGCA CCCCAGGAGC AACGCGCATC AGCATCCCCA
TCGCCAAAGC CAGGGCCGAA GCCAGCTGCA CCTAAGCCAG CTCCGCGGTC ACGGTCCACG
GAAACAAACC GTTCCGGTGG CCCCCGCCCA GGCAACAACC CGTTCGCGTC GCAGCAAGGT
ATGCCGCGGC AAGGGTCACG CCCATCAGGG CAAGGCGGTC AAGGACAAGG GCGCCAAGGT
CGAGGCAACG CTGGTAGCGG TGGTCCACGG CCAGGTGCTC CCCGTCCAGG TAACAACCCC
TTCGCAACTC AGCAAGGAAT GCCGCGCGGT GCCGGGCGTC CAGAACGTGG TGCAAAGCCA
CAAACTGACA ACGCAGCACA TGCAGAGCGT TCTGGTGGTC CACGGCCAGG TGGTCCACGT
CCAGCCGCAC GCCCTGCGGG TGGTGCACCA GCCTCTGGTG GACCTCGTCC AAACCCTGGG
ATGATGCCAG GGCGCACGAG TGCGCCACGT CCAGGCGACC GTCAACCTGC TGGTGCTGGT
GGTGGCCGTG GTGGCCGCGG TGGCCGCGGC GGTTCAGGTG GCGGTGCTCC AGGTGGTGGC
GGTTTCGGGC CCCCTCGTTC TGGTGGCGGC GGACGCCCAG GACCAGGTGG GCGTGGAACC
ACAGCTGGAG CTTTCGGGCG CCAGGGTGGA AAACCAGTAC GTGGTCGGAA ATCAAAGCGG
GCGAAACGCC AAGAATTCGA ACAGATGCAA GCGCCATCCC TGGGCGGTGT CACTGTTCCA
CGTGGCGACG GTTCTACCGT TATCCGGTTG CGTCACGGCG CTTCGTTATC AGATTTTGCA
GACAAAATTG ATGCGAACCC GGCAAGTTTG GTGACTGTGC TATTCCACCT CGGTGAAATG
GCAACAGCAA CCCAATCTCT TGACGAGGAC ACGTTCGGAA CCCTTGGTGC TGAACTGGGA
TACGTCATCG AAATGGTGTC GGCAGAAGAC GAAGACCGTG AGCTCCTTGA GGGGTTCTCC
ATTGACCTCG AGGCCGAGTC TGCTGCCGAG GGTGACGATG AACTGTCAGC CCGTCCTCCT
GTTGTCACCG TGATGGGTCA CGTCGACCAC GGTAAGACAC GCTTGCTTGA TGCGATCCGT
CACTCTGATG TGATCTCGGG TGAGGCTGGC GGTATCACCC AGCACATTGG TGCTTACCAG
GTACGGCACG ACATTGATGG TAATCAACGT CCTCTGACCT TTATTGACAC CCCGGGTCAC
GAAGCATTTA CTGCAATGCG TGCTCGTGGT GCCCAGGTCA CAGATATCGC GATCCTCGTT
GTTGCTGCAG ACGACGGTGT GATGCCTCAA ACCATTGAGG CGTTGAACCA CGCGCAGTCG
GCGAACGTTC CCATCGTTGT GGCTGTCAAC AAGGTGGATA AAGACACCGC TAATCCTGCC
AAGATTCGCC AGCAACTGAC TGAGTACAAC TTAGTTGCTG AAGAGTATGG TGGCGACACG
ATGTTTGTTG ATGTCTCTGC AAAGAACAAC ATGGGCATCG ACGAACTGCT TGAAGCAGTG
ATCTTGACTG CTGATGCGGC TCTCGATTTA CGTGCAAACG CAGACAAAGA TGCTCGTGGT
GTCGCTATTG AAGCCAATCT TGACAAGGGT CGCGGTGCTG TTGCCACTGT TCTTGTGCAA
TCAGGAACAC TGCGTGTCGG TGATGCGATT GTTGCTGGGA CCGCTCATGG CCGTGTCCGT
GCAATGTTTG ACGAGCACGG TACTGCTGTG CAAGAAGCTG GGCCGGCGCG ACCAGTGCAG
GTGCTGGGGT TGACCTCTGT TCCACGAGCA GGCGATGTCT TCCTTGTCAC CTCAGATGAC
CGCACTGCCC GCCAGATCGC TGAAAAGCGT GAGGCTGCTG CGCGAGCCGC ACAGTTGGCC
AAACGGCGCA AGCGCATCAG CTTGGAAGAC TTCACCCAAG CTCTTGAGCA AGGCAAAGTT
GAGACACTCA ACCTGGTCCT TAAGGGCGAT GTGTCTGGTG CGGTCGAAGC GCTCGAAGAT
GCATTGTTGA AGATTGATGT GGGCGACGAA GTTGCGCTGC GAATCATCCA CCGTGGTGTG
GGTGCGATCA CACAAAACGA CGTCAACCTC GCAACCGTCG ACAACGCCAT CATCCTTGGT
TTCAACGTGA AGCCAGCAGA ACGCGTCACA GACCTCGCGG ACCGTGAGGG TGTGGATATT
CGGTACTACT CGGTGATCTA CCAGGCAATT GAGGATGTGG AAGCAGCCCT CAAGGGAATG
CTCAAACCCG AGTATGAAGA AGTTCAATTG GGCACAGCAG AGGTCCGAGA GATTTTCCGT
TCGTCGAAGT TCGGAAACAT CGCCGGGTCG ATTGTTCGTT CCGGGTTGAT TCGCCGTAAC
ACCAAGGCAC GTGTTCTGCG CAACGGTGAG GTTGTCGGAG AGAACTTGTC CATTGAATCG
CTCAAGCGAT TCAAGGACGA CGCTACTGAA GTTCGTGAAG GCTACGAATG TGGTATCGGA
CTCGGTTCTT TCAACGACCT GACCGTAGGT GACATTGTGG AAACCTGGGA AATGCGCGAA
AAACCTCGCG CCTGA
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| Protein sequence | MAKIRVYELA KELGVESKTV MSKLNELGEF VRSASSTIEA PVARRLRDSF PQSGSAAPSE
QTPRKAAPKP GARPAKPAPR AAKEPQGDST PSTPPTTTAP VEAKPTTLPA PSASASANTA
PSKPAAAAAE TTAPSERPAE TTPERSEAPA PQEQRASASP SPKPGPKPAA PKPAPRSRST
ETNRSGGPRP GNNPFASQQG MPRQGSRPSG QGGQGQGRQG RGNAGSGGPR PGAPRPGNNP
FATQQGMPRG AGRPERGAKP QTDNAAHAER SGGPRPGGPR PAARPAGGAP ASGGPRPNPG
MMPGRTSAPR PGDRQPAGAG GGRGGRGGRG GSGGGAPGGG GFGPPRSGGG GRPGPGGRGT
TAGAFGRQGG KPVRGRKSKR AKRQEFEQMQ APSLGGVTVP RGDGSTVIRL RHGASLSDFA
DKIDANPASL VTVLFHLGEM ATATQSLDED TFGTLGAELG YVIEMVSAED EDRELLEGFS
IDLEAESAAE GDDELSARPP VVTVMGHVDH GKTRLLDAIR HSDVISGEAG GITQHIGAYQ
VRHDIDGNQR PLTFIDTPGH EAFTAMRARG AQVTDIAILV VAADDGVMPQ TIEALNHAQS
ANVPIVVAVN KVDKDTANPA KIRQQLTEYN LVAEEYGGDT MFVDVSAKNN MGIDELLEAV
ILTADAALDL RANADKDARG VAIEANLDKG RGAVATVLVQ SGTLRVGDAI VAGTAHGRVR
AMFDEHGTAV QEAGPARPVQ VLGLTSVPRA GDVFLVTSDD RTARQIAEKR EAAARAAQLA
KRRKRISLED FTQALEQGKV ETLNLVLKGD VSGAVEALED ALLKIDVGDE VALRIIHRGV
GAITQNDVNL ATVDNAIILG FNVKPAERVT DLADREGVDI RYYSVIYQAI EDVEAALKGM
LKPEYEEVQL GTAEVREIFR SSKFGNIAGS IVRSGLIRRN TKARVLRNGE VVGENLSIES
LKRFKDDATE VREGYECGIG LGSFNDLTVG DIVETWEMRE KPRA
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