| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0987 |
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| Symbol | |
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| ID | 8380164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1047025 |
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| End bp | 1047579 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645003728 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_003160946 |
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| Protein GI | 256832219 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000842356 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACTGA AAATTGGAAC AATTGGTAAG GCGCATGGCT TGCATGGTGA AGTGTCGGTG
ATTGTCACAA CTGATGTTCC CCAAGAGCGC TTTGTGCCTG GCCACAAGAT CGCCACACAA
CCAGCAGATC GTGGCCCGCT CACTGTGACA CGGCAGCGTG CCCACCAAGA TCGCTGGTAT
GTCACTTTTG AGGAAATCCC TGACCGTACC GTTGCAGAGA GCTACCGTGG TGTTGAGTTG
GTGATCGAGG TTGATCACTC CGATGAAGAC GACGCTTGGT ACCCGCACGA GTTAGAAGGG
CTGGAGGTTC GACGTCTCTC CGGTGCGCGA GTGGGACGTG TGGCAGGGCT TGAGCCTCTC
CCTGCTCAAG ATGCATTGAT TATTGATGAA GATGGTGGCG AACGCGTTTA CCTACCGTTT
TTGAAGATTT TTGTCCCAAC AGTTGATGTT GCCGGCGGCT ATGTGGTGAT TGATCCTCCT
GGTGGGTTGC TTACCGAGGA TCGTGACCAG TTGGTTGTTG TCCGCGATGA TGATGGTGAG
CAGTTGTCGT CATGA
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| Protein sequence | MQLKIGTIGK AHGLHGEVSV IVTTDVPQER FVPGHKIATQ PADRGPLTVT RQRAHQDRWY
VTFEEIPDRT VAESYRGVEL VIEVDHSDED DAWYPHELEG LEVRRLSGAR VGRVAGLEPL
PAQDALIIDE DGGERVYLPF LKIFVPTVDV AGGYVVIDPP GGLLTEDRDQ LVVVRDDDGE
QLSS
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