| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0924 |
|---|
| Symbol | |
|---|
| ID | 8380101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 975455 |
|---|
| End bp | 976195 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645003664 |
|---|
| Product | transcriptional regulator, HxlR family |
|---|
| Protein accession | YP_003160883 |
|---|
| Protein GI | 256832156 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.787459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGTGT GCACAGTGGA TTACGATGAC TTTATGAGTT CGCGACGCAC ATATGCCTCC
TATAACGATG GGTGCGCGGC CGCGCACGCC CTAGATCTCA TTGGGGATAG GTGGACCCTC
ATCGTGGTGC GCGAACTGAT CCTTGGCCCC AAACGCTTTG CGGAATTGCA GCGTGACCTC
ATGGGAATCA GCCCCGCCAT TTTGTCGCAA CGTCTTCGTG ACCTCGAGGA CCGCTCCATT
GTGGTGCGCC GGTCGTTGCC AGCTCCGGCG CGTGTTGACG TCTATGAACT CACCAACTGG
GGTAAGCAAC TCGAAGCAGT GAACGCTGCC TTGTCGCTGT GGGCGGTTTC TTCCCCCGAG
TTCCCCATGG ACGCGGATAT GAGCCCAGAT GCGCTTGTGT TGGCTATGCG GGCCCACGCC
CGCGGCCTTG ACTCACAGCC CTCCCCGGTC ACTGTTCGTC TCATGCTGAC CGATGCGCGC
CTCGAGGATG CTGACCCTGT CACCTACACG GCCACTGTTG GGCCGCACGA AACAACGATT
GTCAAAACCC CGGACCCTGG CCCGGCGGAC GCTATCGTGT CGGCAACAGC AACGAACTGG
AAGGCTCGGA TCGTCGGCGC GTTTCCACTA GACCAGGTGT CGCCGCTGGC TATCGAGGGG
GACGCATCGG CAGTTGACGC ACTTATTGAG GCCACACGGC TGACTGCGCT TGCGCCAACT
GCCAAGCCGA ACCCGGCATG A
|
|---|
| Protein sequence | MAVCTVDYDD FMSSRRTYAS YNDGCAAAHA LDLIGDRWTL IVVRELILGP KRFAELQRDL
MGISPAILSQ RLRDLEDRSI VVRRSLPAPA RVDVYELTNW GKQLEAVNAA LSLWAVSSPE
FPMDADMSPD ALVLAMRAHA RGLDSQPSPV TVRLMLTDAR LEDADPVTYT ATVGPHETTI
VKTPDPGPAD AIVSATATNW KARIVGAFPL DQVSPLAIEG DASAVDALIE ATRLTALAPT
AKPNPA
|
|---|
| |