Gene Jden_0863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0863 
Symbol 
ID8380046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp927256 
End bp928365 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content55% 
IMG OID645003604 
Productpeptide chain release factor 2 
Protein accessionYP_003160828 
Protein GI256832101 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCATTG AATTCGCAAC AGAGATCCCG CAACTTCGCG CAACACTTGC AACTATTTCG 
GCGGTGAGCG ACCCGGAAGC GTTGACAGCG AAAATCGCTG AACTATCTGA TCAAGCTTCT
GCTCCTGACC TATGGGATGA CCCTGCTCAA GCTCAGCAGG TGACCAGTGC GCTGTCGCTG
GCTCAAAACG AACTCAAGCG TATTGAGTCA ATGCAGCAGC GCATTGATGA CCTTGAAGTG
CTGGTGGAAA TGGCTGTTGA GGGCAATGAC GCCGACACGC TCCACGAGGC GGAGGACGAG
TACGCGGCTA TTAAGAAGGA TTTGGACCAA CTTGAAGTGC GCACCTTGTT GTCGGGAGAG
TATGACGCCC GTGAGGCCGT GGTGACGATT CGTGCTGGGG CTGGTGGAGT TGATGCCGCC
GACTTCGCGG AGATGCTGTT GCGCATGTAT TTGCGTTGGG CGGAGCGTCA TGGGTATCCC
ACAGCTGTTC TTGACACCTC CTATGCGGAA GAAGCTGGGT TGAAGTCGGC GACCTTTGAG
GTGAAAGCCC CGTACGCATT TGGAACGCTG TCGGTGGAGG CAGGAACTCA CCGTCTTGTG
CGTATTTCTC CGTTTGATAA CCAGGGGCGG CGCCAAACAT CATTCGCTGC AGTGGAAGTG
GTTCCACTCA TTGAGCAAAC CGACCACGTG GAGATCCCGG ATAACGAGAT CCGTGTTGAT
GTGTTCCGTT CATCAGGACC TGGTGGGCAG TCTGTGAACA CCACAGACTC CGCGGTGCGC
TTAACCCACA TTCCGACAGG GATTGTGGTG TCGATGCAAA ACGAGAAGTC ACAGATCCAA
AACCGTGCTG CGGCGATGCG TGTGCTTCAG TCCCGCTTGT TGTTGGAACG CCAAGCTGAG
GAAAAGGCGA AGAAGAAAGA ACTCGCCGGA GATATCAAAG CGTCGTGGGG CGACCAGATG
CGTTCCTACG TCCTTCAGCC CTACCAGATG GTCAAGGATT TGCGGACAGA ACACGAGGTG
GGGAACACCA ACGCAGTGTT TGACGGACAC ATCGATGATT TCATTGAGGC AGGTATCCGG
TGGCGCCGGT CAAAGGACGC TGACGAGTAA
 
Protein sequence
MAIEFATEIP QLRATLATIS AVSDPEALTA KIAELSDQAS APDLWDDPAQ AQQVTSALSL 
AQNELKRIES MQQRIDDLEV LVEMAVEGND ADTLHEAEDE YAAIKKDLDQ LEVRTLLSGE
YDAREAVVTI RAGAGGVDAA DFAEMLLRMY LRWAERHGYP TAVLDTSYAE EAGLKSATFE
VKAPYAFGTL SVEAGTHRLV RISPFDNQGR RQTSFAAVEV VPLIEQTDHV EIPDNEIRVD
VFRSSGPGGQ SVNTTDSAVR LTHIPTGIVV SMQNEKSQIQ NRAAAMRVLQ SRLLLERQAE
EKAKKKELAG DIKASWGDQM RSYVLQPYQM VKDLRTEHEV GNTNAVFDGH IDDFIEAGIR
WRRSKDADE