| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0858 |
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| Symbol | |
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| ID | 8380041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 924588 |
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| End bp | 925523 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645003599 |
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| Product | type II secretion system protein |
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| Protein accession | YP_003160823 |
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| Protein GI | 256832096 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCAC CACTCATTCT TGGTGGAACC CTCGGATTTG TCCTCGGCCT TGGCCTATGG
GCCATCATGG CGGCACTCAC CTCCCGTCGA GTCACCCTCA TGGAACGCAT CACCCCCTAC
CTGGCCAGCC ACGAAGCACC CGAATCACGG CTCGGCCCCA GCGAAACCAC CAGCCCCTTC
GCGGTCTTCG CGCGACTCAT CGCTCCTTGG ACCAACACTC TGGTGCGGCT CGTCACCACC
GTGTCCAGCC CCAACGCACA AACCGAAAAA CGCCTCGCCA AAGCCAGACG CAACATCACC
CTGCACCAAT ACCGGCTCCA CCAAGTCGCA GCAGGAACAG CAGGACTCAC CCTCGGGATC
CTCGTCAGCC TCTACTTAGC GATCTACCGC AACGCCCACA TCGTTGCGCT CATCATCCTC
GTCATCGCCG CCGCCATCGC CGGAGTCGCA GCCTGCGAAC AACACCTCAC CCACACCATC
CGCCGCCGCA GTGAACGCAT CATCCTCGAA TTCCCCACCA TCGCAGAACT CCTCGCGCTC
GCGGTTGCAG CTGGTGAACC ACCGGCGACC GCATTGGACC GGGTGTCTCG GACCTCCAAC
GGAGAGTTGT CACATGAGCT TGCCATTGTG ATGAATGAGG TGCGTTCAGG TGAGCCGCTG
ACTGATGCGC TCACCCGGTT TGGTGACCGG GTCGATCTGC CGCTCATTAC CCGGTTCGCT
GAGGGTGTCA CTGTCGCGAT TGAGCGTGGT ACCCCACTTG CCGCAGTGTT ACGGGCACAA
GCGCAAGAAG CGCGTGACGC CGGACACCGC ACGTTGATGG AAGTGGGCGG GCAACGAGAG
ATCCTCATGA TGGTTCCTGT TGTCTTCATC ATCCTGCCTA TTTCGATCGT TTTCGCGGTG
TTTCCGTCCT TCACTGCCTT GTCTTTTCTG CCCTAA
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| Protein sequence | MTPPLILGGT LGFVLGLGLW AIMAALTSRR VTLMERITPY LASHEAPESR LGPSETTSPF
AVFARLIAPW TNTLVRLVTT VSSPNAQTEK RLAKARRNIT LHQYRLHQVA AGTAGLTLGI
LVSLYLAIYR NAHIVALIIL VIAAAIAGVA ACEQHLTHTI RRRSERIILE FPTIAELLAL
AVAAGEPPAT ALDRVSRTSN GELSHELAIV MNEVRSGEPL TDALTRFGDR VDLPLITRFA
EGVTVAIERG TPLAAVLRAQ AQEARDAGHR TLMEVGGQRE ILMMVPVVFI ILPISIVFAV
FPSFTALSFL P
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