| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0857 |
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| Symbol | |
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| ID | 8380040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 923737 |
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| End bp | 924591 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645003598 |
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| Product | type II secretion system protein |
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| Protein accession | YP_003160822 |
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| Protein GI | 256832095 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.574937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATAA TCGCCGGACT GATCCTCGGG CTAGGGCTCC TCCTCATCTG GATGTCACTC
TGGGAAGCCC CCGACACCGC CAAAAAAGCA TCCTGGCTCA TCGGTTTCGA AGAAGACCTC
CTCGTTGCAG GGCTCCGCGG TATCTCCACC ACCACGTTCT TCGCAGCCGT GGCCCTGTTC
GCAGCACTCG TCGCCGCGCT CACCTTCGTT ATCACGGGGC TAACCGTCGG TGCGGCTCTG
GCCGGGTTAG CCGCATCAGT AGCCCCCTTC ATCATCGTCA AGTCCCGCGC AGAACGACAA
CGCATCCGCC GCCGAGAAGT GTGGCCAGAC GTCGTAGACC ACCTCATCTC AGGAGTGCGA
GCAGGACTAC CCCTCCCCGA AGCTGTTGCC CACCTAGGCA TGCGCGGACC AGAACAACTC
CGCGAGGAAT TCGCGATCTT CGGACGCGAA TACCGGGCAA CAGGCCGGTT CGACGACTGC
CTCATCACAC TCAAAGAACG CCTTGCAGAC CCCACAGCCG ACCGAGTCAT CGAAGCGCTC
CGGGTCACCC GATCTGTCGG AGGAACAGAA ATCGGGCACC TGCTATCCAC CCTGGCCACC
TTCCTGCGCC AAGACCTCCG AGTACGCGGC GAACTCGAAG CCCGGCAAAG CTGGACCGTT
GGAGGGGCAC GGGTCGCCGC CGCCGCGCCC TGGCTCATCC TCGCCATGCT CGCAGTACGC
CCAGAAGCCG CCAGCGCGTT CAATACCACC CTAGGCGGGA TCCTCATCAT CTCAGGGGCA
GGAGCCACCG CCCTCGCCTA CACGATCATG ATCCGTATTG GTCGACTCCC ACAAGACGAA
AGGGTGCTGC GATGA
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| Protein sequence | MGIIAGLILG LGLLLIWMSL WEAPDTAKKA SWLIGFEEDL LVAGLRGIST TTFFAAVALF
AALVAALTFV ITGLTVGAAL AGLAASVAPF IIVKSRAERQ RIRRREVWPD VVDHLISGVR
AGLPLPEAVA HLGMRGPEQL REEFAIFGRE YRATGRFDDC LITLKERLAD PTADRVIEAL
RVTRSVGGTE IGHLLSTLAT FLRQDLRVRG ELEARQSWTV GGARVAAAAP WLILAMLAVR
PEAASAFNTT LGGILIISGA GATALAYTIM IRIGRLPQDE RVLR
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