| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0805 |
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| Symbol | |
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| ID | 8379988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 867140 |
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| End bp | 868255 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645003546 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_003160770 |
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| Protein GI | 256832043 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01900] succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.390833 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACCAGC ACACGACGAA CCCCTTGACC GCTGCAGCTG CCCACGGCCC CATCGCTCTC
ACTCGCGCAG TGTGTGACAT CGAATCAGTC AGCGGGAACG AACGCGAACT CGCAGACGCC
GTTGAGGACC TGCTCACGCA AGCCACCCAC CTCACAGTGA CGCGCATCGG CAATAACGTT
ATCGCGCGCA CCAACCTGGG ACGGGACCGT CGAGTCGTCA TCGCTGGGCA CCTCGACACA
GTCCCCGTTG CGAGCAACCT TCCCAGTGAA CAACGCACCA TCGACGGACG TGAGTGTATT
TGGGGTCGCG GAACCGTCGA CATGAAAGCA GGAGTTGCAG TTCACCTGGC ACTCGCACTC
GAACTGGACA ACCCACACCA CGACATCACC TGGTGCTTTT ACGACAACGA AGAAGTTGAC
GCCCACCTCA ACGGCCTTGG CGTGGTCCAC CGAACCCAAC CTGAACTGCT CACAGGTGAC
TTTGCCATAC TCGGGGAACC ATCGAACGCC ATCATCGAAG GGGGCTGCAA CGGCACACTC
CGCGCTGTCA TCACCACCAA AGGAATTGCC GCGCACTCCG CACGATCGTG GATGGGAGAC
AACGCAATCC ACGCAGCAGC TGACATCCTC GTACGCCTCT CCGCCTACGA ACCAGCGACG
ATCACCGTGG ACGGGCTCGA TTACCGCGAA GGACTCAACG CAACCGGCAT CACCGGAGGA
ATCGCAGGCA ATGTGATCCC CGACCTCTGC GAAGTGATGG TGAACTACCG GTACGCCCCA
TCCCGGAGCC TCGACGAAGC AGAAGCCCAC GTACGTAGCG TATTTCACGG CTACGAGGTG
CGCATCGTGG ACAAAGCACC CGCCGCTCGG CCAGGACTGG ACGCACCCAT GGCGGCCGAC
TTCGCTAAAG CCGTCCGCTG CGCTACAGGG CAACAACCAG CCCCCAAATA CGGGTGGACA
GACGTGGCGC GCTTCGCCGA ACTCGGCATC CCCGCTGTGA ACTTTGGACC AGGAAACCCT
TCGCTAGCCC ACCACGACAA CGAACACTGT CCAACCAGCG ACATCACGGC AGTCTACAAC
TCACTGAAAG CCTGGCTCAG CGCCCCCAAC TCCTAA
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| Protein sequence | MHQHTTNPLT AAAAHGPIAL TRAVCDIESV SGNERELADA VEDLLTQATH LTVTRIGNNV
IARTNLGRDR RVVIAGHLDT VPVASNLPSE QRTIDGRECI WGRGTVDMKA GVAVHLALAL
ELDNPHHDIT WCFYDNEEVD AHLNGLGVVH RTQPELLTGD FAILGEPSNA IIEGGCNGTL
RAVITTKGIA AHSARSWMGD NAIHAAADIL VRLSAYEPAT ITVDGLDYRE GLNATGITGG
IAGNVIPDLC EVMVNYRYAP SRSLDEAEAH VRSVFHGYEV RIVDKAPAAR PGLDAPMAAD
FAKAVRCATG QQPAPKYGWT DVARFAELGI PAVNFGPGNP SLAHHDNEHC PTSDITAVYN
SLKAWLSAPN S
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