| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0794 |
|---|
| Symbol | |
|---|
| ID | 8379977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 855650 |
|---|
| End bp | 856645 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645003535 |
|---|
| Product | LmbE family protein |
|---|
| Protein accession | YP_003160759 |
|---|
| Protein GI | 256832032 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCATC AGGTGGGCGT GACCATCCAC GAGGTAGTAC CACAAGGACA CCTCCTGGCG
GTGCACGCCC ACCCTGACGA CGAAACACTG TTCACCGGTG GACTCATCGC CTTGTGGCGG
GCCGCAGGCT TACCGGTCAC TGTGGTGACC TGCACCCGTG GTGAACAAGG CGAAGTCATT
CCGGAGCGTC TTGCACATGT TGGTGTGAAC GCCCAGTTGC TTGGGGACTA CCGGACCACG
GAGTTACGGC GTGCCATGGC GGCACTGGGT CCTGGTATTC ACCAGATATT CCTGGACGAG
TTATCCCCTC CTGGTCATCA AGATCATGAC GCAATGAGGT ACACAGACTC TGGCATGCAG
TGGGCGGGCA CGGGGCTTCC TGGTGTCTCG GGGCAAGCAA CCGCTGCCCC AGACGCACCA
CCGACTGCGC TGACGCGGCA ACCACTGGCG GAACAAGCAG AACGCCTCGC CGCACTCATC
ACCACTCTTG CTCCCCACAC TGTGGTCACC TATGAGCCAG GTGGAGGGTA CGGGCACCCC
GACCACGTCC GCGCCGTACA GATCACCCAA GCAGCAGTGC AGATTGCACA GGGCGATGGT
TCGCACGGTC AGCCAACTCA TGTGTGGGGG TGTGTTCAGC CAGCTGAGCT TGCGCGCTGG
GGGCGCGCCC AGATGGCCGA TGTGCCCCGG AATGCGACCG CGCTTCTTCC TGACCCCCAT
GGGCCTCTCC CCTCATTGAA CAGCCATTCA CCGCGCATGA TGCATCTTGC GCACACCTTG
CCCGTGGCGC ATCAGGTTAT GGACGCTCTA CGCGCCTATG ACACCCAAGT GCACTGGGTG
CGGGACGAGC CCCACCCATC ACCAGAGCGT GAGTACCACG GTCACAAGGT TGCCGTGCTT
GGGTCCTATG CGTTGTCCAA CAACATCCTC GCACCTGTCT ACTCGGCCGA GTTCTACGCT
GATCTCAGCG ACCTGTCAGA TAACCTTCAG CAGTGA
|
|---|
| Protein sequence | MTHQVGVTIH EVVPQGHLLA VHAHPDDETL FTGGLIALWR AAGLPVTVVT CTRGEQGEVI
PERLAHVGVN AQLLGDYRTT ELRRAMAALG PGIHQIFLDE LSPPGHQDHD AMRYTDSGMQ
WAGTGLPGVS GQATAAPDAP PTALTRQPLA EQAERLAALI TTLAPHTVVT YEPGGGYGHP
DHVRAVQITQ AAVQIAQGDG SHGQPTHVWG CVQPAELARW GRAQMADVPR NATALLPDPH
GPLPSLNSHS PRMMHLAHTL PVAHQVMDAL RAYDTQVHWV RDEPHPSPER EYHGHKVAVL
GSYALSNNIL APVYSAEFYA DLSDLSDNLQ Q
|
|---|
| |