Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0736 |
Symbol | |
ID | 8379921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 802531 |
End bp | 803595 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645003479 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003160703 |
Protein GI | 256831976 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.585027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.948547 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACCTA ACTCACCCGA AACTTCACCC GAATCTAAGC CACAAACGCG CAAACGTCCA ACCATCACGG ATGTAGCCCG AGCCGCTGGT GTGTCAATCG CTGTCGTATC GTATGCCCTC AATGGCCGTC CCGGTGTCTC CCCGGCAACC CGTGACCGCG TGTTACGCAT TGCCGATGAG TACGGATGGC GACCATCCGC CGCCGCGCGA TCGCTGCGCA CCTCAGAACG ATCCATCGCA CTCGCCTTGA TTCACAGCGA AAGCTCCACC AGCCGATCAG GGCACTTCAT GGACTTCCTT GCTGGGCTCC AACACACCCT GGAAAAACAT GAGCACTCCC TATGGCTCAA AGTAGTTGCA GATGAAGAAC AGGCAGCCAC GATGTATCAC ACCGGTTGGC TGGAACGCCG GTTCGACGCA GTCATTGTGC GCGATGTGAT CCACGATGAT CCTCGCCTAG CCGTCGTCTC CCGTGAGCAT ATCCCTGCTG TCGTTGTTGG GCATCCACAA ATCTCTTCTC CTCACATCTC AGTATGGGTT GATGAACCAC ATGCCATAGG CCAAGCCGTT GACCTTTTGT GCGACCTCGG TCACCGCACT GTAGGTTTTC TTCACAGCGA CCCCACCCGG GACACGGTCA GTCGTACGAC TCAAGCAGCA CGCGTGAGCG CAGCTCGCCA CGGAGCACGT CTCCTCACCC ACGTCACACG GACACCTGAG GATTCAGCAG CTGCGGCTCG AGCCCTACTC ACCGGGACTC AACGCCCCAC CGCACTGGTC ACAGACACAG ATGACACTGC ACTCATCACC TTGGATGTCG CACGCCGCCT CTCACTCAAT GTCCCCTGGG ATCTCTCGCT CATCTGTCTT GGTTCCTCAG CCCAAGCAAC ACTAGCGACC CCATCGCTCA CAAGCATCGA CGTACCCTTC ACCGCACTGG GTGAACATGT AGGCCACGCA TTGATGGACC TCTTGTCCGC TGGGAGCAGC AGTAACATCA CCGTCCCGCT ACCTCCAGTG TCTGTGCGCG GAACAATAGC TCCACCAAGG AATTCTGATA CTTAA
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Protein sequence | MRPNSPETSP ESKPQTRKRP TITDVARAAG VSIAVVSYAL NGRPGVSPAT RDRVLRIADE YGWRPSAAAR SLRTSERSIA LALIHSESST SRSGHFMDFL AGLQHTLEKH EHSLWLKVVA DEEQAATMYH TGWLERRFDA VIVRDVIHDD PRLAVVSREH IPAVVVGHPQ ISSPHISVWV DEPHAIGQAV DLLCDLGHRT VGFLHSDPTR DTVSRTTQAA RVSAARHGAR LLTHVTRTPE DSAAAARALL TGTQRPTALV TDTDDTALIT LDVARRLSLN VPWDLSLICL GSSAQATLAT PSLTSIDVPF TALGEHVGHA LMDLLSAGSS SNITVPLPPV SVRGTIAPPR NSDT
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