| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0687 |
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| Symbol | |
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| ID | 8379872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 738736 |
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| End bp | 741576 |
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| Gene Length | 2841 bp |
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| Protein Length | 946 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645003428 |
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| Product | YhgE/Pip C-terminal domain protein |
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| Protein accession | YP_003160654 |
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| Protein GI | 256831927 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1511] Predicted membrane protein |
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| TIGRFAM ID | [TIGR03057] X-X-X-Leu-X-X-Gly heptad repeats
[TIGR03061] YhgE/Pip N-terminal domain
[TIGR03062] YhgE/Pip C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGC ACACCAACCG CCACGAACAC AACAGATACC TCCCCCACAT GACCCACTCG
CGCATCGCCA ACATCATCGT TGTCTGCGCT GTCGCTCTCA TCCCCCTGCT CTACGCCGGA
CTCCTCTCCT CCGCCTACCA AGACCCCGTC GAACGCATCG GCGCCATGAC TGCAGCCGTC
GTCAACCTCG ACCAACCCCA CACCACGACA GCAGACGGCA CCGACACCAC ACTTGCACTG
GGAGACGAAC TCGAAGAACG CCTCACCCAC CCCACATCCA CAGACGACGT CGGATTCACC
TGGGTGACCA TGAGCCAGGA CGACGCAGGC AAAGCCCTCA CCACCGAAGA CATCCGCGCC
TACCTCGTTA TTCCTGAAAA CTTCTCCGCA ACCGCAGCAA CCCTAGCGGA CACCAACAGC
CCTGCCCCCG ACCCCACACA GCTCACCATC ATCACCGATG ACGCCGTGAA CTACCTGGCC
GGCACAATGG CACGAACTGT CGCCGCATCG CTTCAAGGAT CCCTCTCACA GCAAAGCGCC
CAACAATACA TCGACACGGT GCTTGTCTCT CTAGGGACCA TTCACAACAA AACCGAAGAC
GCCGCAGAGG GCAGCGAACA ACTCCACGCA GGGGCTGACG AACTGCACAC CGGAGTGGTC
ACCCTCGCCG AGGCCGCCGC CTCAGCACAC ACCGGGGCCA GCCAACTCGC CACCGGGGCC
ACTGACCTCT CCACCGGCAC CACCACACTC GCCCACGGTG CACACGATCT CGCCCACGGA
GCCGCAAGCG CATCTACAGG TGCGCAGCAG CTCGCAGACG GAGCCCACAA CCTAGCCAAC
GGCACAGCTG ACCTCTCCAC CGGAGCGTCC GCACTCGCCA CCGGAACCAA CGCCCTCAAC
ACAACCATTC CCTCGCTCAC GCACGGCGCA CAGGCACTCG CCACCGGAGC AACAACGGCT
GCCACTGGAG CACAGGAAGC AGCCAACGGA GCCACACACC TCCACCAAGG AATCACCAAC
TACACCGCTG GAGTCGACCA ACTCTCCGAA TCCATCACTA CGCTGACAAT CCGCAGTGAC
ACGCTCAACA CCGGAGCATC ACACCTGGTG AAAGGAAGCT CCACCCTGAC ACAGGGCGCC
ACCACAGTTG CGGACGGTGC CACACAAGCA GCCACATCAG CCGCTGAACT CGCCGCCAGC
CAGCGCACCC TCGATGCCCG CTCACAAGAA CTCAGTGCCG CACTCACGGA CCTTGCTGAC
CAGTGCAACG ACCTCCCGCA AGCAGGCGCA GAACACCTGT GTGCCCAGTT GCACAACGCA
ACGACACAAC ATCAACAGAT CGCAGCTGGC ATCACCCAAG GAGCCAACGC AACGCAGGTG
CTCGCAGAAG GCGTCACAAA GGTTGCTGAC GGCGCGCACA ATCTCCAGGA TGGGGCAACA
GCATTGTCCA CGGGTGCGAA CGAGATCGCA TCAGCGATCG GTCTGGGCAA ACAACCAGCA
GCGACCACCG TGCGCGGCGC GCTCCACCAC CTCGATACTG GCGCGAGCAC ACTCACCGCC
TCGTCAGCGA CTATTCGCAA CGGCGCAAGT GACCTGGCTG ACGCAGTGGA AGCACTCGCC
GAAGGCACGC AAGGCCTTGC TGACGGTGCA TCCCAGCTGT CTGGGCAGGC ACCACAGCTC
GCATCGGGTG TCACACAATT ACACAAGGGT GCTACCGCAG TGGCAGGCGG TGCAGCGACC
GTTGATCACG GAGCTCAGAC GCTAGCCCAA GGAACCGGCA CACTCACCAA TGGGGTCACC
CATCTTGCGC AGGGCGCGGG GGTCCTGGCT GATGGTGTCA CCTCAGCGCA GGCAGGTGCG
TCACAGTTGG CGCAAGGGAT CCTCCGCCTC AACAGTGGGA TGGGAAGCTT GGACACTGGT
GCGAACACAC TAGCCCAGGG GGCTGAGCGT CTCACTTCTG GTGCCGGTGA TCTGTCTGAC
GCGCTTGATC AGGGTGCACA CGATATTCCG GCATTCACCG AAGAGCAGGC TCAGGACACC
GCTGACGCCG CTGCGAACCT GGCTGACGTG ACAGCGGAAC GTGAAAACGC AGTCCATAAC
GCCGCTGGGG GATTTGGTCC CATGTTCTTT GCGCTGGCGT TGTGGATTGG TGGTATTGCG
ATCTACCTGG TCATGCCTGC ACTGGATCGC CGCCATTCCA CTGCAGAAAA GTGGTGGTGG
TCGGCTGCAC GGCCCATGCT GGTGGGTGGT GTTCTTGGCC TTCTTCAAGC AGCGTTAGCG
GTGCTGGTGG GGAACTGGTT GGTGGATATC CACGCCATGC ACGTGGGCAG GTTTGTGGGG
ATCGCAATGA TCGCGTCGGT GACGTTTGTT GCAGTGAACC AGGCGCTGGT TGCGTTGCTG
AGTTACCGGG GACGGTTTGT GTCACTGCTT CTTCTTGTTC TGCAAATCAC CTCCATGGGC
GGAACGTTCC CTGTGGAAAC AGCCCCACGG TTCTTCGGGT GGGTGCATGA GGCGTTACCC
ATGACCTGGG TGCACTATGC GTTCCGCGCC AGTATCGCTG GACAGGGAAT TGACGATGTG
TGGGGACGTG CGGTGACCCA TCTTGTTGTG TGGTGGGCGG TTGCGGTTGT TGTGACGTTC
GTGATGGCGT GGGTGCGTTC GGGTCGCCGC CCGTTGCCGC ATGATCATGC CAACACCGCG
GACATGATCG ATGAGGTGCA TGCCCCGTAT GGGACCGGTG AGTTGGAGCC GGAAGATGTG
AATCCGATGG ATGAGCTGAT TGATGATGCG GTCGGTGCGC AGGGTGACGA ACGTGAGCGT
GAGTCCTCGT CAGCGCGCTG A
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| Protein sequence | MAQHTNRHEH NRYLPHMTHS RIANIIVVCA VALIPLLYAG LLSSAYQDPV ERIGAMTAAV
VNLDQPHTTT ADGTDTTLAL GDELEERLTH PTSTDDVGFT WVTMSQDDAG KALTTEDIRA
YLVIPENFSA TAATLADTNS PAPDPTQLTI ITDDAVNYLA GTMARTVAAS LQGSLSQQSA
QQYIDTVLVS LGTIHNKTED AAEGSEQLHA GADELHTGVV TLAEAAASAH TGASQLATGA
TDLSTGTTTL AHGAHDLAHG AASASTGAQQ LADGAHNLAN GTADLSTGAS ALATGTNALN
TTIPSLTHGA QALATGATTA ATGAQEAANG ATHLHQGITN YTAGVDQLSE SITTLTIRSD
TLNTGASHLV KGSSTLTQGA TTVADGATQA ATSAAELAAS QRTLDARSQE LSAALTDLAD
QCNDLPQAGA EHLCAQLHNA TTQHQQIAAG ITQGANATQV LAEGVTKVAD GAHNLQDGAT
ALSTGANEIA SAIGLGKQPA ATTVRGALHH LDTGASTLTA SSATIRNGAS DLADAVEALA
EGTQGLADGA SQLSGQAPQL ASGVTQLHKG ATAVAGGAAT VDHGAQTLAQ GTGTLTNGVT
HLAQGAGVLA DGVTSAQAGA SQLAQGILRL NSGMGSLDTG ANTLAQGAER LTSGAGDLSD
ALDQGAHDIP AFTEEQAQDT ADAAANLADV TAERENAVHN AAGGFGPMFF ALALWIGGIA
IYLVMPALDR RHSTAEKWWW SAARPMLVGG VLGLLQAALA VLVGNWLVDI HAMHVGRFVG
IAMIASVTFV AVNQALVALL SYRGRFVSLL LLVLQITSMG GTFPVETAPR FFGWVHEALP
MTWVHYAFRA SIAGQGIDDV WGRAVTHLVV WWAVAVVVTF VMAWVRSGRR PLPHDHANTA
DMIDEVHAPY GTGELEPEDV NPMDELIDDA VGAQGDERER ESSSAR
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