Gene Jden_0681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0681 
Symbol 
ID8379866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp733827 
End bp734459 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content59% 
IMG OID645003422 
Productriboflavin synthase, alpha subunit 
Protein accessionYP_003160648 
Protein GI256831921 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGCG GCATCATTTC GGAAATGGGC GTCGTGTCCT CGGTGACGAC TCGAGGAGAT 
GGGGCAATCG TTGAGGTGCG CGCCCACGAC ATCCTCGAAG GTCTTCCACC CGGTGGTTCG
CTGGCGGTCG ATGGTGTCTG CTTAACTGCG CTCCCTGATG AGGCAGGTCG CGGTGTTTTC
ACCGCGGATC TGATGGGGGA AACACTGGCT CGAACAACCC TTGGGTCGCG GGGGGTGGGT
TCCCGCGTCA ACCTGGAACG GTGCGTAACG CCCACCACGC ACCTTGACGG TCACGTTGTG
CAAGGTCATG TTGACTCGGT TGGCACAGTG ACCGCGCGCA CTGACCATGG CGCATGGACA
ACCCTACGCT GCACGTTTGA CCCAGTGTTT GCGCCACTTG TCGCCGAGAA GGGGTCTATC
GCACTTAACG GGGTGTCCCT GACGATCACT GGGGTCAGCG AGCCCCATGA GACAAGCGCG
TGGTGCGAGG TTGGTCTCAT CCCCACCACA ATGGCACACA CCAACTTAGG CGATGTGCAC
ATCGGTGATC ACCTCAACCT AGAGTTTGAT GTGCTTGCCA AGTACACCCA ACGCATGCTT
GCGTTTTCTG CTGCAACTGG AGTTGACCAG TGA
 
Protein sequence
MFSGIISEMG VVSSVTTRGD GAIVEVRAHD ILEGLPPGGS LAVDGVCLTA LPDEAGRGVF 
TADLMGETLA RTTLGSRGVG SRVNLERCVT PTTHLDGHVV QGHVDSVGTV TARTDHGAWT
TLRCTFDPVF APLVAEKGSI ALNGVSLTIT GVSEPHETSA WCEVGLIPTT MAHTNLGDVH
IGDHLNLEFD VLAKYTQRML AFSAATGVDQ