| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0621 |
|---|
| Symbol | |
|---|
| ID | 8379806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 660542 |
|---|
| End bp | 661258 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645003358 |
|---|
| Product | putative membrane-associated protein |
|---|
| Protein accession | YP_003160588 |
|---|
| Protein GI | 256831861 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0586] Uncharacterized membrane-associated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCAG TAATTGGGGC GCTGGGGAGC GTCAATGATG TGTTGATGTC GGTGGCGACA
AGCTATGAGG GTTCGTGGCT GCTGTTTTTG TTTTTGTGGC TTTTCATCAC TCTTGACGGC
GTGTTGCCTA TTTTCCCGTC TGAGTCGCTG GTCATTGCTG TTGTTGCATT GGCTGTGTCG
GCTGGTTCTC CACCGTTATG GGCAGTTGTG GTGGTGGCGA TTGCGGGTGC GATGTGTGGT
GATGTGACGA CTTATCACAT TGGACGTCGA GCAGTTCGGC GGTCGTGGCG TTGGCTCCAG
TGGGTGAGGG TTGCGCGGGT GCTTGATTGG GCGGAACGGT TGGTGGCTCG CAAGCCGGCG
ACCATCATTG TGGCTGCGCG CTATATCCCT GGTGGTCGAG TGGCTGTGAA TTTTACGGCT
GGGAGGATGT TTTTCCCACG TCGTGGGTTT GTGTTTTTTG ATGCCATTGC TGCGGTGACA
TGGTCTGTGT ATTCCACGGT TATTGGAATG GGTGCGGGGG CGTGGTTTGA GGGGCACCCT
ATTTATGCGG TGATTGTGGG TGTTGGCGGT GGCGTGTTGA TTGGGGTGGC TGTCGATGCG
GTGTTGCGTC GGGTGCTTGC TCACCGCGGG GCGGCTTTGA AGTCTATGGA TGGGTATGTT
CCCCCGCACG TCCCGGATGT TGAGACTCCT TTCACCCGCA CGGATTCGGA GTCGTGA
|
|---|
| Protein sequence | MDAVIGALGS VNDVLMSVAT SYEGSWLLFL FLWLFITLDG VLPIFPSESL VIAVVALAVS
AGSPPLWAVV VVAIAGAMCG DVTTYHIGRR AVRRSWRWLQ WVRVARVLDW AERLVARKPA
TIIVAARYIP GGRVAVNFTA GRMFFPRRGF VFFDAIAAVT WSVYSTVIGM GAGAWFEGHP
IYAVIVGVGG GVLIGVAVDA VLRRVLAHRG AALKSMDGYV PPHVPDVETP FTRTDSES
|
|---|
| |