| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0615 |
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| Symbol | |
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| ID | 8379800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 655043 |
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| End bp | 655975 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645003352 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_003160582 |
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| Protein GI | 256831855 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTGTGT GGGGCACCGA CCGTGAGGTT GGTGCCCCAC ACCTGTTTGT GAGGGATTGT
GTGGTTGGCG TGATTCGGAT TCGTTGTGAT GTGGCTTATC GTGGCACGGA CTTTGTGGGG
TGGGCACGTC AGCCGGGTTT GCGCAGTGTT CAGGGCACCC TTGAGGACGC GTTGGAGCGT
TTGATGGGGG AGCGCATTGC GGTGACTGTT GCTGGGCGTA CGGATGCTGG TGTCCATGCG
CGTGGGCAGG TTGTTCATTG TGATGTTCCT GGTGACCGGT GGGAGCGGTT ACCGGGCCGG
TCGGATCGTA CGCCGGGTGA GGCTCTGCGA GCTAAGTTGG GTGGGATTTT GCCTTCCGAT
GTGGTGGTTC GTCGGGTTGC CCCGGCACCG CCTGGTTTTG ATGCGCGTTT TTCGGCGTTG
TCGCGGACCT ACTATTACCG TATTGCTGAC GATGTGATGA TGCGTGATCC GTTGACGGCG
CCTTTTGTGT TGTGGGTACG CTCACCTCTT GATGTTGAGG CGATGAATCG TGGTGCAGCG
CCGTTGGTGG GGTTGCGGGA TTTTGCGGCG TTTTGTAAGC CGCGTCCAGG CGCATCGACT
ATCCGTGAAC TGCAGGATTT CCGCTGGGAG CGGGTGGAGC AGGGGCCAGA TGAAGGGCTT
GTGCGTGCCA CTGTGCGCGC GGATGCGTTT TGTCACAATA TGGTGCGCGC GTTGGTGGGT
GCGTCTCTTG ATGTGGGGCG GGGGGTGCGT GGTGAAGAGT GGTTGGTCCA GGCGTTAACG
TCGAAGTCGA GGGTGAATTC ATCGGCGGTG GTGCAGCCAC ATGGGTTGAC TCTCGAGCAG
GTAGCGTATC CGCCGGTCGA CCAACTAGCT GACCGGGCGC AGGCGATCCG TGCCCGCCGG
ATGGATGAGG AACTGTTGGA CGGCGGTGTG TGA
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| Protein sequence | MLVWGTDREV GAPHLFVRDC VVGVIRIRCD VAYRGTDFVG WARQPGLRSV QGTLEDALER
LMGERIAVTV AGRTDAGVHA RGQVVHCDVP GDRWERLPGR SDRTPGEALR AKLGGILPSD
VVVRRVAPAP PGFDARFSAL SRTYYYRIAD DVMMRDPLTA PFVLWVRSPL DVEAMNRGAA
PLVGLRDFAA FCKPRPGAST IRELQDFRWE RVEQGPDEGL VRATVRADAF CHNMVRALVG
ASLDVGRGVR GEEWLVQALT SKSRVNSSAV VQPHGLTLEQ VAYPPVDQLA DRAQAIRARR
MDEELLDGGV
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