Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0536 |
Symbol | |
ID | 8379721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 579622 |
End bp | 581031 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645003268 |
Product | isochorismate synthase |
Protein accession | YP_003160503 |
Protein GI | 256831776 |
COG category | [H] Coenzyme transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1169] Isochorismate synthase |
TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.448554 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCATTA TTGCAGACCG GTTGGTGGCG CTGAGCGTTA CAGTGGGGCT TGTGAATCCT GTTGATCGTG TCGCGTCGTC GTCGTTGTCG TCTGGGAGTG TGTCGGGGCA GGTGCCGAGG TTGGTGGCGC ATACTGTTTC GGTGGAGCCG TTGGGTGAGG GTGTGGATGC CCTGTTGGCG GTGTTGCCTG GTTCTGGTGC GTTGGCGTGG GTGCGTCGTG GTGAGGGGTT GGTGGGTTGG GGTGAGGCTG CTCGGGTGGT GACTTCTGGT CCGCAGCGGT TTGAGGCGGC GCAGGCGTGG TGGGCGCAGG TGCGCGAGTT GGCGGTGGTG CGTGACGATG TGCGTCGTGC AGGCACGGGC TTGGTTGCGT TTGGGTCGTT TGCTTTTTCG TATGCGTCTG CTGATGAGTC GGTTCTTATT GTGCCGAAGG TTGTGGTGGG GCGTCGCGGG TCGTCGTGGT GGTTGACAAC GATTTGTGCG GAGGATGCCT CGGGTCAGAC CAGTGCGCAT GTGGATTTGT TGGCTGCGCA TTTGGATGAG GTGCGTCACC ATGACCCGGT GGTGTCGGCG GGGTCGGTGT CGTTTTCGGA TGGGTCGGTG TCGCGTGCGC AGTGGATGGA CATTGTGGCA CAGGCTGTCG GGAGGATTCG TGGCGGTGAG CTGGACAAGA TTGTGCTGGC TCGCGATGTG GTGGCTACTG CCGAACGTCC TATTGATACC CGATTTTTGT TGACGCATTT GGTGTCTGCG TATCAGGGGT GTTGGACGTT TAGTGTGGGG GGTTTGGTGG GGGCGACCCC GGAGTTGCTG GTGCGTGCGG AGCGCGGGTT GGCAACGTCA CGGGTGTTGG CGGGCACTAT CCAGCGGACG GGCGATGATG AAACCGATAC TGCTCGTGCC GGGTTGTTGG CGAAGTCATC AAAGGATCTC GAGGAGCATG AGTATGCGGT GATTTCGGTA GCGGAGGCGT TGGCTCCTCA CTGCACGTCG TTAAATGTTC CTGAGTCGCC TTTTGTGCTG CATTTGCCGA ACGTGTTGCA TTTGGCCAGT GATGTGACTG GGGTGATTGA TCCGCACCGT CATGAAACGT CGTTGTCGTT GGCGGCGGCG CTTCACCCGA CTGCAGCGGT GTGTGGCACA CCGACTGTGC GGGCTGCTCA CATGATCGCG GACATTGAGT TGATGGACCG TGGCCGGTAT GCGGGCCCGG TGGGGTGGAT GGGTGGTGAT GGTGATGGTG AGTGGGGTAT TGCGTTGCGC TCTGGCCACC TTGACCCAAC CGATGCCAGG GTGATGCGCG TGTTCGCTGG GTGCGGCATT GTTGCCGCGT CAGTCCCAGC TGATGAGTTA GTTGAGACTG ACGCGAAGCT CGCTCCGATG GTGTCGGCGT TGCAAGGTGG GGTGGCGTAG
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Protein sequence | MLIIADRLVA LSVTVGLVNP VDRVASSSLS SGSVSGQVPR LVAHTVSVEP LGEGVDALLA VLPGSGALAW VRRGEGLVGW GEAARVVTSG PQRFEAAQAW WAQVRELAVV RDDVRRAGTG LVAFGSFAFS YASADESVLI VPKVVVGRRG SSWWLTTICA EDASGQTSAH VDLLAAHLDE VRHHDPVVSA GSVSFSDGSV SRAQWMDIVA QAVGRIRGGE LDKIVLARDV VATAERPIDT RFLLTHLVSA YQGCWTFSVG GLVGATPELL VRAERGLATS RVLAGTIQRT GDDETDTARA GLLAKSSKDL EEHEYAVISV AEALAPHCTS LNVPESPFVL HLPNVLHLAS DVTGVIDPHR HETSLSLAAA LHPTAAVCGT PTVRAAHMIA DIELMDRGRY AGPVGWMGGD GDGEWGIALR SGHLDPTDAR VMRVFAGCGI VAASVPADEL VETDAKLAPM VSALQGGVA
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