| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0473 |
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| Symbol | |
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| ID | 8379658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 509253 |
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| End bp | 509813 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645003205 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_003160440 |
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| Protein GI | 256831713 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCACCTG ACAGCACGGT TGGGCGGGAT AATGGTGGGG TGAGTGAACA TCCTTACCAA
CGCACCCCTG TTTCTGTTGC GCCGGCTGCT TCTGGTGTAC CGCATCTGGT GTATCACGAG
CCCCGGATCC CGGGGAATAC GGGGAGTGCC ATCCGGTTGG CGGCTGTGAC TGGTGCCCGA
CTGCATGTGG TGGAACCGTT GGGTTTTGAT TTGTCCGAGG CGAAGGTGAA GCGTGCCGGG
TTGGATTACC ACGATCTGGC GGTGATGGAC ATTCACCCAT CATTTGATGC TCTCGTGGAT
TTGTACCCCG ATTCACGGGT TTTTGCGTTT ACAACTCGTG CAACGGTTCC ATTTACGGAG
GTCACGTACT CGCCTACGGA CCTGTTGGTG TTTGGTCCCG AACCAACCGG GCTTGACGAT
GCGGTTCTCA ACCATCCCCG GATCACCGGT GAGGTGCGTA TCCCTATGCT TCCTGGGTTG
CGATCCTTGA ACTTGACGAA TTCGGCGTCG ATCGCCGTGT ATGAGGCCTG GCGGCAAAAC
GGGTTTCGCG AAGGGGTGTA A
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| Protein sequence | MAPDSTVGRD NGGVSEHPYQ RTPVSVAPAA SGVPHLVYHE PRIPGNTGSA IRLAAVTGAR
LHVVEPLGFD LSEAKVKRAG LDYHDLAVMD IHPSFDALVD LYPDSRVFAF TTRATVPFTE
VTYSPTDLLV FGPEPTGLDD AVLNHPRITG EVRIPMLPGL RSLNLTNSAS IAVYEAWRQN
GFREGV
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