Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0428 |
Symbol | |
ID | 8379614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 453432 |
End bp | 454460 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645003159 |
Product | periplasmic binding protein |
Protein accession | YP_003160396 |
Protein GI | 256831669 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0856962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.313337 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACAC TGAACCGTGC CATTGCAGGG ACTGCAGCAG CAGTCCTTGC GCTCACCCTC GCAGCGTGCT CCACCGGCGA AACAACCCCT GATGCCACCA GCACACCGCA AGAAACCAGC AGCGGGGAAT TTCCCGTCAC CATCAACCAC GCTTTCGGTG ACACCGTCAT CGACGAGGAA CCACAAACAG TGGTGGCCTG GGGGTGGGGT GCCGCCGACG CGATCCTCGC ACTCGGAGTT GTTCCCGCAG CAATCCCCGC GCAACCCTAC GGCGGCGACG AAAACGGCAT CCTGCCCTGG ATCGCCGACG AACTCACCGA ACTTGGAGCC GACACGCCCA CCATCCTCAC CGCTGGGACT GAAGCACCCA TTGAGGAAAT CGCCGCCGTC GAACCAGACA TTGTGTTGGC ACCCTACTCC GGGCTCACCC AAGAAGAGTA TGACCTCCTC TCCGCCTTCA CTGATGTTGT CGCCTACCCA GACCAGCCCT GGGCCACCCC ATGGCGTGAC GTCATCTCCA TCACCGGGCA AGCCCTTGGA CGCCCCGACG AAGCAGCCGA CGTGCTGTCC ACCATTGACG CAACAATCGC CGACAACGCC GCAGCCAACC CCCAATTTGA GGGTCTGAGT ATCGCCCAAG TGTGGCCCTC CGCCGACGCG TTCTACGTGT ACCTGCCCGC AGACCCGCGC GTAGAGTTCT CCGAAGACCT CGGTTTCGTG TCCGCACCCT CCGTGACGGA ACTCGACACC GGCGAATCCA CGTTCTACTA CACCCTGTCA CCCGAACTGC TCGACCAACT CGACGCCGAC CTCCTCCTGG TGTACGCAGA CACCCAAGAC AACTTCGACG CGTTCCTCAC CTCAGACCAG GCGAAACTTC TCCCCCAAGT GGCAACAGGG GCCGTCGCCG ACATTATTGG AACCGCACAG GTCGCCTCCG TGTCACCACC GACCGCACTC TCCTTGACCT GGGGAGTCGA CGAATACACC GAGAAACTCG CAGCAGCAGT GGAAAAGCTC AACAAGTAG
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Protein sequence | MTTLNRAIAG TAAAVLALTL AACSTGETTP DATSTPQETS SGEFPVTINH AFGDTVIDEE PQTVVAWGWG AADAILALGV VPAAIPAQPY GGDENGILPW IADELTELGA DTPTILTAGT EAPIEEIAAV EPDIVLAPYS GLTQEEYDLL SAFTDVVAYP DQPWATPWRD VISITGQALG RPDEAADVLS TIDATIADNA AANPQFEGLS IAQVWPSADA FYVYLPADPR VEFSEDLGFV SAPSVTELDT GESTFYYTLS PELLDQLDAD LLLVYADTQD NFDAFLTSDQ AKLLPQVATG AVADIIGTAQ VASVSPPTAL SLTWGVDEYT EKLAAAVEKL NK
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