Gene Jden_0426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0426 
Symbol 
ID8379612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp451483 
End bp452550 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content64% 
IMG OID645003157 
Producttransport system permease protein 
Protein accessionYP_003160394 
Protein GI256831667 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4779] ABC-type enterobactin transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.459391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCC CGACCACGAA ACCCCGCACC TGGCACACCG AAGCAACCAG CACATCGGTT 
ATCCGGCACT CAGCTATGCT GCTGCACCGC CGCCTCACCG TTGTCACCCT CACCACCGTG
ATCCTCCTCG TGGCCGTAGC CACGATCACC ATGATGACGG GACGTTACCC GCTGGCGCCC
GCCGACATCC TCGCTGTCCT GACCGGCGGC GGAAACCAGC TAGACAGTTA CATTCTGTTT
GGTGTTCGCC TTCCACGACT TGCCATCACC ATGCTCGCTG GTGTGGCCCT TGGATTATCT
GGTGCGCTGC TCCAAAGCCT GCTGGGAAAC CCGCTCGCTT CCCCAGATCT TCTCGGCATC
TCTGGGGGAG CGGCCGTAGC CGCGATCATC GTCACCTTGG GGGTAGGGGC AACCGGGCTG
GCAGTCACCG CAGCAGCCCT CATGGGGGCC ACCGTGGTCG CAGTTCTCAT TCTTGCGGCG
GCACGGCACG GGCAAGGAAC CGGACACCGG CTGGTCCTGA CCGGGGTGGG GTTCGCGTTC
CTCGCATCGG CGATCATCGG GTTTATGATC AAACGCGCAC AGATCAACGA AGCCCAATCC
GCGCTCTTTT GGACCGTGGG GTCCGTCGCA AACTCCACGT GGACGTCAGT GCTCATTGTT
GCGCTCACTG TCGCCATCGC CCTCCCCGGT GTGGTCTACG CCTCCCGGGT ACTGCCCATC
CTGCAACTTG GGTCCGCCAC CGCCAACGGC CTAGGACTCG CCGATGTGCG CGCCCGCCGC
GTTGTCGTGG CCACCGCCGT GATCCTGGCG GCAGGAGCCG TGTCCGTTGT TGGTCCGATC
TCGTTTGTCG CGTTGTGTGC GCCCGCGATT GCGCGGCGCA CTGTTGGCCG CGGCAGCAAC
GCACTGACCG TATCAGCTCT TGGCGGTGCC CTCATGCTGG TTGTCAGTGA TGCAGCCGCA
CAACACCTTT TTGCAGGAGC CGTACCTACC GGTGTCATCA CCGGGGTGAT CGGCGCCCCG
TACCTGCTGT GGCTTCTTGC CACACCCACG AAAGGAACAG CCCTGTGA
 
Protein sequence
MIAPTTKPRT WHTEATSTSV IRHSAMLLHR RLTVVTLTTV ILLVAVATIT MMTGRYPLAP 
ADILAVLTGG GNQLDSYILF GVRLPRLAIT MLAGVALGLS GALLQSLLGN PLASPDLLGI
SGGAAVAAII VTLGVGATGL AVTAAALMGA TVVAVLILAA ARHGQGTGHR LVLTGVGFAF
LASAIIGFMI KRAQINEAQS ALFWTVGSVA NSTWTSVLIV ALTVAIALPG VVYASRVLPI
LQLGSATANG LGLADVRARR VVVATAVILA AGAVSVVGPI SFVALCAPAI ARRTVGRGSN
ALTVSALGGA LMLVVSDAAA QHLFAGAVPT GVITGVIGAP YLLWLLATPT KGTAL