| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0341 |
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| Symbol | |
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| ID | 8379533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 361632 |
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| End bp | 362570 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645003076 |
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| Product | Squalene/phytoene synthase |
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| Protein accession | YP_003160315 |
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| Protein GI | 256831588 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.171198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCA AAGCCACAAC TCCCCAAGCC CTGTATCAGC GCGCCGCCCA GGACGCAGCG
CACACGGTGA TCCGGCAGTA TTCCACAAGT TTCGGGGTTG CTACCGCGAT GCTTACCGAG
CCTGTGCGCA CTCATGTGCG CAACATTTAC GCACTTGTGC GCGTGGCCGA CGAAATCGTG
GATGGAAGCT TCGATCCGGC ACCCATCCCC CACCTCACTG CGGCACTTGA TGCGCTTGAA
GCGGAGGTTG CCCAGGCCAT GGACCGCGGG TTTTCCACGA ACCTCATTGT GCATGCGTTT
GCTCATACAG CAGTAACCTG TGGCATCACG GACGCTGAGA TCGCCCCGTT TTTCGCCTCC
ATGCGCCGTG ACCTCGGGGA CCCGTATTAC ACTGCTGAGG AGCTGTCGAC CTACATTTAC
GGGTCCGCTG AGGTCATTGG GATGATGTGT TTGCGCGCGT TTGCTCAGGC ACCTGATGTC
GCTCCCACAC AGCGCTCCAC CCTGGTCGCT GACAATATTG ACGCAGCGCG CGCTCTTGGG
GCGGCATTCC AAAAGATCAA TTTCCTGCGA GATTTGGCCG CAGATCAAGG CGAATTAGGG
CGCTATTACT TCCCCGACGT TGCGGCAAAA GGTCTCACAG AACCGGTCAA GAACAAGATC
CTCGCCGACA TTGAGCACGA CCTTGACGTT GCCCGACAAG GCATTGCACG CCTTCCCGGT
TCCTCGCGTG GCGCGGTCAA GGCAGCCTAT TTACTCTTCA CCTCCCTCAC TCGGAAACTG
CGGCGCGCCT CATGTGACGA GTTGCGCACC CGCCGTCTTC GCCTCACCAC TCCCCATAAA
GCCGTGGTGC TGGCCCGGTC AGCGCTCCCC ACCACACCCC GCCCCCGCAT CCAGCATTCT
GCTGGGTGGA CTGATTCGAA GGCACTGACA CACCCATGA
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| Protein sequence | MTSKATTPQA LYQRAAQDAA HTVIRQYSTS FGVATAMLTE PVRTHVRNIY ALVRVADEIV
DGSFDPAPIP HLTAALDALE AEVAQAMDRG FSTNLIVHAF AHTAVTCGIT DAEIAPFFAS
MRRDLGDPYY TAEELSTYIY GSAEVIGMMC LRAFAQAPDV APTQRSTLVA DNIDAARALG
AAFQKINFLR DLAADQGELG RYYFPDVAAK GLTEPVKNKI LADIEHDLDV ARQGIARLPG
SSRGAVKAAY LLFTSLTRKL RRASCDELRT RRLRLTTPHK AVVLARSALP TTPRPRIQHS
AGWTDSKALT HP
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