| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0340 |
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| Symbol | |
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| ID | 8379532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 360007 |
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| End bp | 361635 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645003075 |
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| Product | phytoene desaturase |
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| Protein accession | YP_003160314 |
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| Protein GI | 256831587 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0903063 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAC CATCACCACG CATCGCCGTG ATCGGCGGTG GGCTGGCAGG ACTATCCACA
GCCGCCCTCC TTGCAAAAAA CGGTTTGACC GTGGACTTAT ATGAGAAAAA TAGCGACCTG
GGCGGGCGAT GTGGGGTGTG GGAAACCGAC GGGTACCTGT TTGACACAGG CCCGTCGTGG
TACCTCATGC CCGAGGTGTT CGATAAGTTT TTCCACGATG TAGGAACATC CACTGCCGAG
CAACTCAATC TCACCACCCT CACCCCCGGT TACCGGGTGT TCACCGAGAA CCACCCTGTT
CCCGTTGATG TGACCAGCGG CCAGGCAGAA GAGCTGTTTG ATTCGTTGGA GGCTCGTGGC
GGGGACAAAC TTCGCGCCTA CCTTGACTCT GCGTCCAGTA CCTACAAGCT CGCCCTTGAC
CACTTTTTAT ACACCGATTT CCGCACCGTA AAACCGTTTT TTGATCGGGA GATCACCAGC
CGAGTCGGGG AACTTCCCAC TTTGCTCGGG ACATCACTGA ACACGTTCAT TAATAAGCGG
TTTTCACACC CGGTCTTACG CCAGATTTTG GGCTACCACG CCGTGTTTTT GGGGACCAGC
CCAGACCGCG CTCCTGCGAT GTACCATCTC ATGAGCCACC TGGACCTGGT TGACGGTGTG
CAATACCCAC AGGGCGGGTT CATGAGCATC ATTAGGGCGA TCGAAAAGAT CGCCCTCGAC
CTTGGTGTGA CCATTCACCG GGGTGCGAAC GTGACCCGCA TCCTCACCAC CGACAACCCC
ACCCCCACCA GTCGGGCTGG GCTCACCGCT AGTGCGCAGC GCATCGTCCA TCAGGTTGCC
GGGTCTCGAC TCTCGTCACA TACCGGGTAC CGCACCCGCA CCGTGGTGGG CCTTCAGACC
GAAAACGGCG AGGGTCAGCG CACCACCTAC GACGCTGACA TCATTGTGGG CGCAACTGAC
CTTCACCACT TGGAAACCCA GCTCCTCTCC CCCGAAGAGC AGTCCTACCC GCAGGAATAT
TGGGATAAAA AAGACCCTGG TCCGGGTAGC GTGTTGGTTC ACCTTGGGGT CCGTGGTGAG
GTACCTGAAC TCACCCACCA CAACCTGTTC TTCGTCAAAG ACTGGGACGA GAATTTTGAC
GCGATTTATG GGAAGAACAA ACACCTGCCC AACCCTGCGT CGTTGTATGT GTGTAAACCT
TCCCACAGCG ACCCGGATGT GGCACCGGAC GGGCACGAGA ACGTGTTTAT TTTGGTTCCT
GTCCCGGCCG ACCCCGGTCT TGGGCATGGT GGGCGTGACG GCGACGGTGA CGCCCTCGTG
GAGCAGGCAG CAGACGCCGC GATTGCGCAG GTCGCTGCCT GGGCGAAGAT CCCTGACCTG
GCGCAGCGCA TCGTGTTGCG TCGCACGGTC GGTCCCGCCG ATTTTGTCAC TGACGTGAAC
GCGTGGTCTG GTGGGGCGCT GGGCCCGGCT CACACTCTTG CGCAGTCGGC AATGTTCCGT
ACAACGAACC GGTCCCGGCT TGTTGATGGC CTGTGGTATG CCGGTGGGTC CACGATCCCG
GGGATCGGGC TACCGATGTG CATCATCAGT GCTGACATCG CCACGCGCGG GATCCTCGCG
GAGATTTAA
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| Protein sequence | MNTPSPRIAV IGGGLAGLST AALLAKNGLT VDLYEKNSDL GGRCGVWETD GYLFDTGPSW
YLMPEVFDKF FHDVGTSTAE QLNLTTLTPG YRVFTENHPV PVDVTSGQAE ELFDSLEARG
GDKLRAYLDS ASSTYKLALD HFLYTDFRTV KPFFDREITS RVGELPTLLG TSLNTFINKR
FSHPVLRQIL GYHAVFLGTS PDRAPAMYHL MSHLDLVDGV QYPQGGFMSI IRAIEKIALD
LGVTIHRGAN VTRILTTDNP TPTSRAGLTA SAQRIVHQVA GSRLSSHTGY RTRTVVGLQT
ENGEGQRTTY DADIIVGATD LHHLETQLLS PEEQSYPQEY WDKKDPGPGS VLVHLGVRGE
VPELTHHNLF FVKDWDENFD AIYGKNKHLP NPASLYVCKP SHSDPDVAPD GHENVFILVP
VPADPGLGHG GRDGDGDALV EQAADAAIAQ VAAWAKIPDL AQRIVLRRTV GPADFVTDVN
AWSGGALGPA HTLAQSAMFR TTNRSRLVDG LWYAGGSTIP GIGLPMCIIS ADIATRGILA
EI
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