Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0335 |
Symbol | |
ID | 8379527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 356013 |
End bp | 358121 |
Gene Length | 2109 bp |
Protein Length | 702 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645003070 |
Product | MMPL domain protein |
Protein accession | YP_003160309 |
Protein GI | 256831582 |
COG category | [R] General function prediction only |
COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
TIGRFAM ID | [TIGR00833] Transport protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.114406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAACGA CATCCTCACG TCCAGCACGA CAATGGCGCA CCTACATCAC CCCACTCATC CTCGTCATCG TCTGGCTCGG AGCAGCCGCT TTCGGTGGGC CGCTCTTTGG ACGAGTCGAA GAAGTCTCCA CCAACGACCA AACCCAATTC CTCCCCAGCT CCGCTGGCGC TACCCGAGTC CAAGAAGAAC TCCCCCGCTT CCTCGGCGAC GACACCATCC CCGCCATCGT CCTCGTCACC GCCGCTGACG GCGAACAAGT CGCAGGCCCA GACCTCCAAA CCATCACCGA AGCCGTCGCC CAAGCAGCAA CCGACATCGG AGCCATCGGA GACCCAAGCC CCGCCATCCC CGCACAAGAC GGCGAAGCAG CCCAAGCCTT CATCGCCCTC GACGCGGAAG GAGAAACCGC ACAACAAGTC ACCGAACTAC GCGACCACCT CATCAAAGCC CTACCAGACA CCCTCGACGT CTACGTGACC GGACCAGCAG GACTCACCGC CGACCTCTCC ACTGCATTCG CTGGAATCGA CGGAATCCTC CTCGCCGCAG CACTCATCAC CGTGCTCATC ATCCTTATCG TGGTCTACCG CTCACCTATC CTCCCCTTCG CAGTCCTCGC CACCTCCATC TTCGCGCTCG CCGCAGCCCT CGGAGTCGTC TTCGTCCTCG CCCAACAAGG CGTCTTCCTC CTGTCATCAC AAACCCAAGG CATCCTGTTC ATCCTCGTCA TCGGTGCCGC CACCGACTAC GGCCTGCTCT ACACCGCACG CTACCGCGAA GAACTCCGCA ACTACGACAA CAAACTCACC GCCACCAAAG CCGCAATCCG CGGATCAGTG GAACCCATCC TCGCCTCCGG CGGAACAGTC ATCGCCGGAC TACTATGCCT CCTGCTCTCC GACCTCGAAT CCAACCGGAT CCTCGCACCC GTCGCAGCAA CCGGCATCGT CTTTTCCATG CTCGCCGCGT TCACACTCCT GCCCGCCATC CTCTTCCTCT TCGGACGCAC CGCATTCTGG CCCCGCAAAC CACACGTCGA CCCCAACCAC TCACCACTAC CCACCAAAGG TATCTGGGCG CGGACCCCAC AACTCGTTGC CCGCCGTCCC CGCCTCGTCT GGGTCACCTC CACCCTCATC CTCATCGTCG GAAGCCTCGG CGTTCTCCAA CTCAAAGCAG ACGGCATCTC CTCCTCCGAC CTCGTCATCG GCTACTCCCA AGCACGAGAA GGACAACAAA AACTCTCCGA ACACTTCCCC GGAGGAACCG GATCACCCAC CTACATCCTC ACCACCGAAA ACAACATTGA GGACATCACC ACCACCCTCA ACACAATCAA CGGTGTCGCA AACGTCAACG AACCCACCAT CAACCAAGGT GACGCCCTCA TTTCCGTCAC CCTCACCGAC GCCTCAGACT CCCAAGCCGC CAAAGACACC GTCACCGCCA TCCGCGCTGA CATGCCCGAC GGCACCTACG TAGGCGGAAC CACAGCCACC GCCATCGACT CCGACAACGC CTCCATCCGA GACCGCAACC TCATCATCCC CATCGTGTTG CTCGTCATCG TCCTCATCCT CGGTGCACTC CTCCGAGCCG TTGTCGCACC ACTCATCCTC ATCGCCACCG TGGTCCTGTC CTTCGGCACC GCCCTGGGAG TCTCCGCCTG GATGTTCAAC CACGTCTTCG ACTTCCCCGG AGCCGAACCA GCCGTCCCAC TCTTCGCGTT CGTCTTCCTC GTCGCACTCG GCATTGACTA CAACATCTTC CTCATGACCC GAGTACGCGA AGAAATCCTC CACCACGGCC TCCACGACGG CATCACCCGA GGACTCTCCA TCACCGGAAG CGTCATCACC TCCGCAGGTA TCGTCCTGGC CGCAACCTTC ACCGCGCTCG CGGTGATCCC GGTGCTGTTC CTCGTGCAAA TCGCGTTCAT CGTGGCGTTC GGTGTCTTGC TCGACACGTT GCTTGTGCGC ACCCTTCTCG TGCCAGCACT GTCCCACGAG TTGGGTCGTG CCCTATGGTG GCCCAGCAAA CTCTCACGAC CCGACTTCAC CCCCGTGCCA CGCCCTGACC TGGAAGCAAA GGAACCAGCC GCGTCATGA
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Protein sequence | MATTSSRPAR QWRTYITPLI LVIVWLGAAA FGGPLFGRVE EVSTNDQTQF LPSSAGATRV QEELPRFLGD DTIPAIVLVT AADGEQVAGP DLQTITEAVA QAATDIGAIG DPSPAIPAQD GEAAQAFIAL DAEGETAQQV TELRDHLIKA LPDTLDVYVT GPAGLTADLS TAFAGIDGIL LAAALITVLI ILIVVYRSPI LPFAVLATSI FALAAALGVV FVLAQQGVFL LSSQTQGILF ILVIGAATDY GLLYTARYRE ELRNYDNKLT ATKAAIRGSV EPILASGGTV IAGLLCLLLS DLESNRILAP VAATGIVFSM LAAFTLLPAI LFLFGRTAFW PRKPHVDPNH SPLPTKGIWA RTPQLVARRP RLVWVTSTLI LIVGSLGVLQ LKADGISSSD LVIGYSQARE GQQKLSEHFP GGTGSPTYIL TTENNIEDIT TTLNTINGVA NVNEPTINQG DALISVTLTD ASDSQAAKDT VTAIRADMPD GTYVGGTTAT AIDSDNASIR DRNLIIPIVL LVIVLILGAL LRAVVAPLIL IATVVLSFGT ALGVSAWMFN HVFDFPGAEP AVPLFAFVFL VALGIDYNIF LMTRVREEIL HHGLHDGITR GLSITGSVIT SAGIVLAATF TALAVIPVLF LVQIAFIVAF GVLLDTLLVR TLLVPALSHE LGRALWWPSK LSRPDFTPVP RPDLEAKEPA AS
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