Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0244 |
Symbol | |
ID | 8379439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 262310 |
End bp | 263905 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645002978 |
Product | ABC transporter related |
Protein accession | YP_003160221 |
Protein GI | 256831494 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.46044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCA CCCCGAACCA CACCCCAGGT ATCCCGACGC AGGCAGGCGC GACGACTCCT GCACTCACCG TCGAAAACCT CACCATCACA AGCTCAGACG GGTCCCTCGT AGACGATGTG AGTTTCACGC TGCACCCCGG GGAGTGTGTG GCCTTCATTG GTGAGTCCGG TGCCGGCAAG TCTCTCACCG CTAAGGCACT CATTGGTTTG CTTCCCACCC CACTTCAGGC ACACGGCACC ATCACGCTTG GTGACACTGT ACTGTCCAAC CCCACGCCTG CACCGCAACG AACGTGGCGG ACCGTCCGGG GGGCGCGCAT CGGCTACATC GCTCAAGACG CTCTCGTGTC ACTGGACCCG CTGCGCACAC TACGCGAGGA AGTGTCCGAG GCCGCAGCCA TCCACACCCC CCGCCGACTC ACCCGTCGCG AGCGGGCCAC CATTGCCACC GACGCCCTCA CCGCTGCTGC ATTCCCCACC CCCACCCACT ACCTCACGGC GCACAGCCAC GAACTATCCG GCGGAATGAG ACAGCGAGCC CTCATCGCCT CCGGGCTGTC CGCAACCCCT GACATTCTCA TCGCTGACGA ACCTACCACC GCACTTGACC ACACCACCCA ACGCGCCATC ATGGCCCTTT TGCGCACCAT CGCTGCACAA GGAACCGCCG TGATCATTGT CAGTCATGAC CTTTCCCTTG TTCGTGACCT CGCTGACACC ACCCTCGTGT TCCACAATGG TCGTGTTGTC GAACAGGGAC CCACACCCAC AATTGCCACC CACCCGAGCA GTGCGCCGGG GGCAGCACTA GCGGCCGCAT CGGCTGTGCC CACGCCACCC GCGCCACCAA CGACTGATCC TCACCTCGCC CCCGTGCTCA CCCTCACTGG TGTGAGCAAA ACCTTCCATC GTGCCCACAG TGCCCCTACC CGTGCGGTCA ACGATGTGTC CTTCACCCTG CGCAAAGGCG TCACCCACGG GCTGCTCGGC GAATCCGGGT CCGGCAAATC GACCCTCGCC CGCCTCATTT TGGGACTTGA CGCCCCCGAC CAGCCGCATC GCACTCCTCG GGGCGCTCTT CCAGATGCAG GCCCAGCCCC CATTGATATT CCTGCTGGAG TGCGGCTGGG CTGGGTGCCA CAAGACCCCA CCTCCACCAT GAACCCGCGT TGGTCCGTGG CGCGGATCCT CGCTGAAGGC CACAACCCGC GTCGTCCGCG GACCGTACCA ACACAGGCGC TGGAACAGTC ACTTGCCGAT GTGTCCCTCA CCTCTGACCT GCTTACCCGT CGCCCCCATG AACTGTCGGG TGGGCAACGC CAACGTGTTG CGATCGCCCG TGCGTTAGCG GGCAACCCTG ATCTTCTCAT CTGTGATGAA GCAACATCGG CGCTTGATGT CACGGTGCAA GCACGCATCT TGGATCTTCT GGACCGGCTA CGCACACAAC GTGGTCTCGC GATACTGCTC ATTACTCACG ACATCCGGGT TGTGGCTCGT CTTGCACACA CGGTGTCCGT GCTGCACCGC GGGTCAGTGG TCGATCAGGG TGCGACCGCA GACATTCTTG CCAGCACGCG CTACGCGAGC GCGTGA
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Protein sequence | MTATPNHTPG IPTQAGATTP ALTVENLTIT SSDGSLVDDV SFTLHPGECV AFIGESGAGK SLTAKALIGL LPTPLQAHGT ITLGDTVLSN PTPAPQRTWR TVRGARIGYI AQDALVSLDP LRTLREEVSE AAAIHTPRRL TRRERATIAT DALTAAAFPT PTHYLTAHSH ELSGGMRQRA LIASGLSATP DILIADEPTT ALDHTTQRAI MALLRTIAAQ GTAVIIVSHD LSLVRDLADT TLVFHNGRVV EQGPTPTIAT HPSSAPGAAL AAASAVPTPP APPTTDPHLA PVLTLTGVSK TFHRAHSAPT RAVNDVSFTL RKGVTHGLLG ESGSGKSTLA RLILGLDAPD QPHRTPRGAL PDAGPAPIDI PAGVRLGWVP QDPTSTMNPR WSVARILAEG HNPRRPRTVP TQALEQSLAD VSLTSDLLTR RPHELSGGQR QRVAIARALA GNPDLLICDE ATSALDVTVQ ARILDLLDRL RTQRGLAILL ITHDIRVVAR LAHTVSVLHR GSVVDQGATA DILASTRYAS A
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