Gene Jden_0244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0244 
Symbol 
ID8379439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp262310 
End bp263905 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content63% 
IMG OID645002978 
ProductABC transporter related 
Protein accessionYP_003160221 
Protein GI256831494 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.46044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CCCCGAACCA CACCCCAGGT ATCCCGACGC AGGCAGGCGC GACGACTCCT 
GCACTCACCG TCGAAAACCT CACCATCACA AGCTCAGACG GGTCCCTCGT AGACGATGTG
AGTTTCACGC TGCACCCCGG GGAGTGTGTG GCCTTCATTG GTGAGTCCGG TGCCGGCAAG
TCTCTCACCG CTAAGGCACT CATTGGTTTG CTTCCCACCC CACTTCAGGC ACACGGCACC
ATCACGCTTG GTGACACTGT ACTGTCCAAC CCCACGCCTG CACCGCAACG AACGTGGCGG
ACCGTCCGGG GGGCGCGCAT CGGCTACATC GCTCAAGACG CTCTCGTGTC ACTGGACCCG
CTGCGCACAC TACGCGAGGA AGTGTCCGAG GCCGCAGCCA TCCACACCCC CCGCCGACTC
ACCCGTCGCG AGCGGGCCAC CATTGCCACC GACGCCCTCA CCGCTGCTGC ATTCCCCACC
CCCACCCACT ACCTCACGGC GCACAGCCAC GAACTATCCG GCGGAATGAG ACAGCGAGCC
CTCATCGCCT CCGGGCTGTC CGCAACCCCT GACATTCTCA TCGCTGACGA ACCTACCACC
GCACTTGACC ACACCACCCA ACGCGCCATC ATGGCCCTTT TGCGCACCAT CGCTGCACAA
GGAACCGCCG TGATCATTGT CAGTCATGAC CTTTCCCTTG TTCGTGACCT CGCTGACACC
ACCCTCGTGT TCCACAATGG TCGTGTTGTC GAACAGGGAC CCACACCCAC AATTGCCACC
CACCCGAGCA GTGCGCCGGG GGCAGCACTA GCGGCCGCAT CGGCTGTGCC CACGCCACCC
GCGCCACCAA CGACTGATCC TCACCTCGCC CCCGTGCTCA CCCTCACTGG TGTGAGCAAA
ACCTTCCATC GTGCCCACAG TGCCCCTACC CGTGCGGTCA ACGATGTGTC CTTCACCCTG
CGCAAAGGCG TCACCCACGG GCTGCTCGGC GAATCCGGGT CCGGCAAATC GACCCTCGCC
CGCCTCATTT TGGGACTTGA CGCCCCCGAC CAGCCGCATC GCACTCCTCG GGGCGCTCTT
CCAGATGCAG GCCCAGCCCC CATTGATATT CCTGCTGGAG TGCGGCTGGG CTGGGTGCCA
CAAGACCCCA CCTCCACCAT GAACCCGCGT TGGTCCGTGG CGCGGATCCT CGCTGAAGGC
CACAACCCGC GTCGTCCGCG GACCGTACCA ACACAGGCGC TGGAACAGTC ACTTGCCGAT
GTGTCCCTCA CCTCTGACCT GCTTACCCGT CGCCCCCATG AACTGTCGGG TGGGCAACGC
CAACGTGTTG CGATCGCCCG TGCGTTAGCG GGCAACCCTG ATCTTCTCAT CTGTGATGAA
GCAACATCGG CGCTTGATGT CACGGTGCAA GCACGCATCT TGGATCTTCT GGACCGGCTA
CGCACACAAC GTGGTCTCGC GATACTGCTC ATTACTCACG ACATCCGGGT TGTGGCTCGT
CTTGCACACA CGGTGTCCGT GCTGCACCGC GGGTCAGTGG TCGATCAGGG TGCGACCGCA
GACATTCTTG CCAGCACGCG CTACGCGAGC GCGTGA
 
Protein sequence
MTATPNHTPG IPTQAGATTP ALTVENLTIT SSDGSLVDDV SFTLHPGECV AFIGESGAGK 
SLTAKALIGL LPTPLQAHGT ITLGDTVLSN PTPAPQRTWR TVRGARIGYI AQDALVSLDP
LRTLREEVSE AAAIHTPRRL TRRERATIAT DALTAAAFPT PTHYLTAHSH ELSGGMRQRA
LIASGLSATP DILIADEPTT ALDHTTQRAI MALLRTIAAQ GTAVIIVSHD LSLVRDLADT
TLVFHNGRVV EQGPTPTIAT HPSSAPGAAL AAASAVPTPP APPTTDPHLA PVLTLTGVSK
TFHRAHSAPT RAVNDVSFTL RKGVTHGLLG ESGSGKSTLA RLILGLDAPD QPHRTPRGAL
PDAGPAPIDI PAGVRLGWVP QDPTSTMNPR WSVARILAEG HNPRRPRTVP TQALEQSLAD
VSLTSDLLTR RPHELSGGQR QRVAIARALA GNPDLLICDE ATSALDVTVQ ARILDLLDRL
RTQRGLAILL ITHDIRVVAR LAHTVSVLHR GSVVDQGATA DILASTRYAS A