Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0204 |
Symbol | |
ID | 8379399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 220462 |
End bp | 221397 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645002938 |
Product | HpcH/HpaI aldolase |
Protein accession | YP_003160181 |
Protein GI | 256831454 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.446132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGA ACAACACAAC GCAACACGAA CCACCACCAG GCGGTCGCGC ATCGGTAGGT GACACTCCTG ACACGCCACG TGTACGCAAC GAACGGGCAG CGAAACTCCC CGCGAACCTG TCCCGATCCT GGCTGCTCGT CAACGCCACC AAACCCGACC AGTTCGAACC GGCACTACTC TCAGAAGCCG ACTCAGTCAT TTTTGACCTC GAAGCCGCTG TGCCTGACGA CCGGAAAGAA GAAGCACGCT TCCACGTGGT CAACGCCCTG AACACTGGGC TATCTGCATG GGTGCGCATC AACGCCATGG ACACAGAGCA CTGGAAAACA GACCTCGAAG CGTTGATCCA AACCCCAGGG CTCCGCGGTG TCATGCTCGC CCAAACGGAA AAACCTGAAC AAGTGACCCT CACCGCCATG CGGTTACACG CAGGCACCCC CGTGATCGCT CTCATCGAAT CGGCGCTCGG CGTGGAAAAC GCCACCGCGA TCGCGTCCGC CCCCGGAACC TTCCGGCTCG CCTTCGGTGT CAACGACTTC CGCAAAGACA CCGGCGCCAC TGAAGACCCC ATGGCGTTAG CCTACGCACG AGGGAAACTT GTCGTCGCGT CCCGCGTGGG TAAACTCCCC GGCCCTATCG ACGGCCCGCC CGCGGCTACA GACTCCGTAG ACGCCGTACT GGCTGCCTGT GGGGTCACAC AACGCATGGG AATGACCGGG AAAATGTGCC TCACCATTGA CCAGGTCGAC GACGTGAACC GTGGACTGTC CCCCAGCGAG GAAGAACTCG AATGGGCGCG GGAACTCATC ACCCAACACG AACAAGCGCA ACGCGGACGC GGCGTGGACA TTGCGGACGG GTCCTACCTG CCACGCCTCG CCCGTGCCCA AAAAGTTGCG AACCTCGCCG ACACCTACGG CCTGTGGAAA AACTAG
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Protein sequence | MTTNNTTQHE PPPGGRASVG DTPDTPRVRN ERAAKLPANL SRSWLLVNAT KPDQFEPALL SEADSVIFDL EAAVPDDRKE EARFHVVNAL NTGLSAWVRI NAMDTEHWKT DLEALIQTPG LRGVMLAQTE KPEQVTLTAM RLHAGTPVIA LIESALGVEN ATAIASAPGT FRLAFGVNDF RKDTGATEDP MALAYARGKL VVASRVGKLP GPIDGPPAAT DSVDAVLAAC GVTQRMGMTG KMCLTIDQVD DVNRGLSPSE EELEWARELI TQHEQAQRGR GVDIADGSYL PRLARAQKVA NLADTYGLWK N
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