Gene Jden_0204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0204 
Symbol 
ID8379399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp220462 
End bp221397 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content61% 
IMG OID645002938 
ProductHpcH/HpaI aldolase 
Protein accessionYP_003160181 
Protein GI256831454 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.446132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA ACAACACAAC GCAACACGAA CCACCACCAG GCGGTCGCGC ATCGGTAGGT 
GACACTCCTG ACACGCCACG TGTACGCAAC GAACGGGCAG CGAAACTCCC CGCGAACCTG
TCCCGATCCT GGCTGCTCGT CAACGCCACC AAACCCGACC AGTTCGAACC GGCACTACTC
TCAGAAGCCG ACTCAGTCAT TTTTGACCTC GAAGCCGCTG TGCCTGACGA CCGGAAAGAA
GAAGCACGCT TCCACGTGGT CAACGCCCTG AACACTGGGC TATCTGCATG GGTGCGCATC
AACGCCATGG ACACAGAGCA CTGGAAAACA GACCTCGAAG CGTTGATCCA AACCCCAGGG
CTCCGCGGTG TCATGCTCGC CCAAACGGAA AAACCTGAAC AAGTGACCCT CACCGCCATG
CGGTTACACG CAGGCACCCC CGTGATCGCT CTCATCGAAT CGGCGCTCGG CGTGGAAAAC
GCCACCGCGA TCGCGTCCGC CCCCGGAACC TTCCGGCTCG CCTTCGGTGT CAACGACTTC
CGCAAAGACA CCGGCGCCAC TGAAGACCCC ATGGCGTTAG CCTACGCACG AGGGAAACTT
GTCGTCGCGT CCCGCGTGGG TAAACTCCCC GGCCCTATCG ACGGCCCGCC CGCGGCTACA
GACTCCGTAG ACGCCGTACT GGCTGCCTGT GGGGTCACAC AACGCATGGG AATGACCGGG
AAAATGTGCC TCACCATTGA CCAGGTCGAC GACGTGAACC GTGGACTGTC CCCCAGCGAG
GAAGAACTCG AATGGGCGCG GGAACTCATC ACCCAACACG AACAAGCGCA ACGCGGACGC
GGCGTGGACA TTGCGGACGG GTCCTACCTG CCACGCCTCG CCCGTGCCCA AAAAGTTGCG
AACCTCGCCG ACACCTACGG CCTGTGGAAA AACTAG
 
Protein sequence
MTTNNTTQHE PPPGGRASVG DTPDTPRVRN ERAAKLPANL SRSWLLVNAT KPDQFEPALL 
SEADSVIFDL EAAVPDDRKE EARFHVVNAL NTGLSAWVRI NAMDTEHWKT DLEALIQTPG
LRGVMLAQTE KPEQVTLTAM RLHAGTPVIA LIESALGVEN ATAIASAPGT FRLAFGVNDF
RKDTGATEDP MALAYARGKL VVASRVGKLP GPIDGPPAAT DSVDAVLAAC GVTQRMGMTG
KMCLTIDQVD DVNRGLSPSE EELEWARELI TQHEQAQRGR GVDIADGSYL PRLARAQKVA
NLADTYGLWK N