| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0187 |
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| Symbol | |
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| ID | 8379382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 198359 |
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| End bp | 199816 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645002921 |
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| Product | glucoamylase-related glycosyl hydrolase-like protein |
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| Protein accession | YP_003160164 |
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| Protein GI | 256831437 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCCCGT CACCGTTGAC GCCGCCCTCG CCTGGGCAAC CGCGTGTGTC GCGCCGAACG
GTGTTGATCG GTGGGGCACT TGCATTAGGG GCGTCATCGT TGGGTGCCGC AGGGTTGTGG
TGGCCGCGAA GTGGCCCCAC ATTTGCGACC CTCGCGGAGA AACCACTTCA CGCTCACACT
GTTGCTTTCT TGACTGACAC GGCACGGGTT GCGGTCAGCG ATCCTTCTGA GGTGATTCCG
GGCACTCGCG TTGCGATGAA CGCGCACAAC CCTGCCGAGT TGGTGGCCCG GGAAGCGCAG
TGGTTGGCTT CGTTGGCACC GTGGACTCGC GACTCAGCCC ACGCTGATCT CATCCGTGAC
GCTTACCTGG ACATGTTTGT GCTCAGTGAA GGGCTTGAGG CTCCGGTCGC TGGGTGGACA
CCTCTGTGGC GTTATGTGTG GCCCCGCGAC ACGGCGCATA TTGCTGTGGC CTTTGCTGCT
GCGGGTGATG TGAACCGTGC GCAGCGGGCG TTAGATTTTT TGGCCCGGGT GCCGCGCACT
GCCCGCGGTT GGTTTGAGGC TCGCTATACC TTGGATGCAC GGGGGGCCCC GGACGACCGT
GCGCCCCAGT TTGACGGGTT GGGGTGGACG GCGTGGGCGT TGGGGTGGAT CACCGAGCAT
GGGTTCACTC AGCCGCTTGC TGACGGTTCG GATCCGACTC TTACGGTGGG TGAAACAGCC
GATGTGCGCC CGTGGGCTCG TTCACGGGGC GAGTTTGTAC GCCGGTATGA GCCGCTTATA
CATCGGCTCA CCGCGACGTT GCTTCATGGT GTGCATATCA CTAACGGGCA GGTCCCGGTG
TCGTCGGACT ATTGGGAGAT TCGTGAGAAC ACGGTGACAC TTGGGACGGT CGCTCCCACG
TTGGCTGGCC TGCAACATCT TGCTGTGCTC CATGCCGAGT TGGGGGATAA GGCACGGGCA
CGCGAGTGCG CGCGTGCCGC CGAAACTGTT GCCCAGTATG TGGTCAGCGC TTTTGGGTCG
CGCGGTTATC CGCGCCGCGC GGACGGGTAT ACCGTGGATT GTGCGATTCC GTTTCTTTGC
CCGCCGTACA CGCGGGCCTG CCCTGACCCG ACGGGGGTTG GTGAGGCACT TGTGCGGGCA
GGTGAGGTGC TGCGTCAACC TGCTGGCGGG TTAACCCCTG GGGAAGATTG GCACCGTGAT
GGGGTGTCAT GGACTCCGGA GACGGCTGTT TTTGCCTTGG TGGAAGCGCA TCTTCCTACT
CTCGATGCGC GAACACGTGC AGTAGACCGG TTGACGTGGC TGGGCCGTCA CCGGACCTCA
ACCGGTACTT TGACGGAAAA GGTCCTGTCG GACGGTTCCC CCTCTGCGGT CGCTCCCTTG
GCGTGGACTG CTGCAACAGT CGCGTTAACC ACTCACGCGT TGTCGGTGGT GTCACCAGTG
GTGGATGTTC CCCTGTAA
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| Protein sequence | MSPSPLTPPS PGQPRVSRRT VLIGGALALG ASSLGAAGLW WPRSGPTFAT LAEKPLHAHT
VAFLTDTARV AVSDPSEVIP GTRVAMNAHN PAELVAREAQ WLASLAPWTR DSAHADLIRD
AYLDMFVLSE GLEAPVAGWT PLWRYVWPRD TAHIAVAFAA AGDVNRAQRA LDFLARVPRT
ARGWFEARYT LDARGAPDDR APQFDGLGWT AWALGWITEH GFTQPLADGS DPTLTVGETA
DVRPWARSRG EFVRRYEPLI HRLTATLLHG VHITNGQVPV SSDYWEIREN TVTLGTVAPT
LAGLQHLAVL HAELGDKARA RECARAAETV AQYVVSAFGS RGYPRRADGY TVDCAIPFLC
PPYTRACPDP TGVGEALVRA GEVLRQPAGG LTPGEDWHRD GVSWTPETAV FALVEAHLPT
LDARTRAVDR LTWLGRHRTS TGTLTEKVLS DGSPSAVAPL AWTAATVALT THALSVVSPV
VDVPL
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