| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0129 |
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| Symbol | |
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| ID | 8379325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 141465 |
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| End bp | 143096 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645002863 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
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| Protein accession | YP_003160107 |
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| Protein GI | 256831380 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCTCT CACTGCCCCG CCCACGCGCG CTCCTCCTCG ATTTCGGCGG CGTTGTCTTC
CTCACCACAA AAAATCCTGC CGGACCCAGC GAAGCAACCA ACCGACTCGC CGCGATTCTC
GCCCGAGCGG GACACGAGGT AAACCGTGAA GCCCTCAGCG CATCGATCAG CGCTGGCCAC
ACGGCACTCA AACACTGGAA GCACGCCTCC TCGCGGCGTC GCCACCCCAA AGAACTCAGC
CACCGCGAGA TCGTCATGGA TTTCCTCACC TCCGACCTAC CCGACGCTCA CCGGCACACA
CTCGCCACAG AAGCGCGGCG AGTGCTGCAC GACATCAACT CGGTCATGTC CCACCACACG
GTGCGCACCG GAATCTTCGA CCTCCTAGCG GTGGCGCGCG AACATGACAT CCCCGTCGTC
ATCGTGTCCA ACGCCCACTC AGGAGACAAC CACCGCCGAC TCTTGCGCGC CCACGGGCTC
GACCACCTCA TCACCGCGCA GATCTATTCC GATGAAGTAG GGATCCGTAA ACCCAACCCC
GAAATGATTG AGCTGGGTGC CGCCGCTGCT GGTGTGGACC CGCACGAATG CTGGTACGTC
GGGGACACGA TGGACCGAGA CGTCGTCACC GGCCGTAGGG CTGGAGTTGG GGCAGTTTTC
CTCACCACCT CCCAGCACAC GGCGAACCCG CCATTTGCAG TTGCCGATGC GCCAGACGCG
ATCGTTGCTG AACCGGCTGA CCTGGTTCCC CTGTTCGCAG AGGCGTTGAC CAGAACTGTT
ACCCCGCCCG CAGTTCCCTC AAGCCAAAGC GACAACGACG GGAAGCGGGA ACGGCCCGTG
TTGTTCCTTG ACCACGGCGG AGTCATTTCC ACGTCTCACA GTGATGACAC GTTACTCACT
CCGTTCATGT CCCAGGTGGC GCAGCTGCTA TCTCGGGCGG GACGTGCGGT CTCTGTGGAC
GAGGTGCGTC ACCTTCTCAC CTCTGCTCGG GCCGCCCACA AAGACTGGAA AGCGCAACGC
CGGTGGGAGT TTGATGCCAC CGGTCAGCCG TTACGTGAGA TCACTGCACG TGAGTTTTGG
GTGGACCTCT TTGGTGGTCC GCTCAGCGAC CAGGAGCGTG CGCTCCTGCG CACGGAAGCA
GTCGCTCTCA TGGCAGCGTA TGGGCGTGCG AAGTCACGGC GCACTCAGCG CCCGGGGATT
CATGACCTGG TTGCCGCATG CCACAGCGCG CAGGTGCCGG TTGTCGTGGT GTCGAACACG
GTCAGTGGGG TTGCAGTGCG CGCTGAGTGC GCGGCGATTG GCATTGATCA GTTCATTGCC
GCGTACGTGT GCTCAGACGA AGTTGGAGTG CGTAAACCAG ACGCCCGAAT CCTTGAGCAT
GCGGTTGCAG TAGTGAACGC TGACCCGGCG ACCAGCTGGT TTGTGGGGGA CAAACCAGAA
AACGATGCGG TTGTTGCGCG CAGTGTGGGG GTGGCCAACC GCGTGGTGAT GCGCGGTGGA
GCAACCCCTG ATCACCTCCT TGAGGAGGCA TTGAACTCGG GGTTAGCCAC GCACATTGTG
GATTCACCCC GTGGCGTCTT GGACGCTATG ACCATCCTTG GTCGCCCTGA TGTTCCTGCT
ATTCACGTGT AA
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| Protein sequence | MTLSLPRPRA LLLDFGGVVF LTTKNPAGPS EATNRLAAIL ARAGHEVNRE ALSASISAGH
TALKHWKHAS SRRRHPKELS HREIVMDFLT SDLPDAHRHT LATEARRVLH DINSVMSHHT
VRTGIFDLLA VAREHDIPVV IVSNAHSGDN HRRLLRAHGL DHLITAQIYS DEVGIRKPNP
EMIELGAAAA GVDPHECWYV GDTMDRDVVT GRRAGVGAVF LTTSQHTANP PFAVADAPDA
IVAEPADLVP LFAEALTRTV TPPAVPSSQS DNDGKRERPV LFLDHGGVIS TSHSDDTLLT
PFMSQVAQLL SRAGRAVSVD EVRHLLTSAR AAHKDWKAQR RWEFDATGQP LREITAREFW
VDLFGGPLSD QERALLRTEA VALMAAYGRA KSRRTQRPGI HDLVAACHSA QVPVVVVSNT
VSGVAVRAEC AAIGIDQFIA AYVCSDEVGV RKPDARILEH AVAVVNADPA TSWFVGDKPE
NDAVVARSVG VANRVVMRGG ATPDHLLEEA LNSGLATHIV DSPRGVLDAM TILGRPDVPA
IHV
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