Gene Jden_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0093 
Symbol 
ID8379290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp102958 
End bp103683 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content54% 
IMG OID645002828 
ProductExsB family protein 
Protein accessionYP_003160072 
Protein GI256831345 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0207264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.133167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAA ACAAAGTCGC ATTACTTTTG TCCGGTGGAC CCGATTCAGT CACCTTGCTG 
TATGACCTGC TCGCGCAGGG ACACGAAGTG GTCGCTCTCA CGTACAACTT CGGTGAAGCC
GAGGCGCAGA ATGAACGTGA CGCAGCTACT GCAATCGCAG CTGAACTTGA GGTCGAACAC
CACTTCTTCG ACTTCTCTGG ACCGCTGAAG GAGTTCTACC ACCTTCCACA ACCACAGTTC
TTGCGGATGG CAATGATGCG TTCATCCGAG GCCGGTCCAG TGAGTAAAAG TGAGGACGTG
CAACCCTTTG GGTCCGCGAT TGCGCTACTC CTCACTGCGT CATGGGCAGT CAAAAATGAC
ATTTCTTCGG TGTTCTATGC AGTGCACGCA GACGACTCAC ATTTCACCGA CAACCACCGT
GAGTACTTCG ACAAACTCAG TGATGTGACC AGAGAATGTG AAGGTCAAGA TTTTGCTGTG
GAGTTCCACA CGCCCTACCT TGACACTCGC AAGTTCGATG TGATCAACAA AGGGATCACC
TTGGGTGTTC CCTTTGGCCG CACATGGAGT TGTGCAGCTG GCGGGAGCAC ACACTGCGGT
CAGTGCGCGC CCTGCATCAA CCGGAGTGGT GCTTTCGCAG TGATCGGCGA ACAGGACCCC
GTGGCCTACC TCCACGACCC ACAAGAACAC CTCGAGAACC GGTTCGCAGG TTCTGCCCAG
TTGTGA
 
Protein sequence
MSKNKVALLL SGGPDSVTLL YDLLAQGHEV VALTYNFGEA EAQNERDAAT AIAAELEVEH 
HFFDFSGPLK EFYHLPQPQF LRMAMMRSSE AGPVSKSEDV QPFGSAIALL LTASWAVKND
ISSVFYAVHA DDSHFTDNHR EYFDKLSDVT RECEGQDFAV EFHTPYLDTR KFDVINKGIT
LGVPFGRTWS CAAGGSTHCG QCAPCINRSG AFAVIGEQDP VAYLHDPQEH LENRFAGSAQ
L