Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0014 |
Symbol | |
ID | 8379214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 15856 |
End bp | 16758 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645002751 |
Product | ABC transporter related |
Protein accession | YP_003159996 |
Protein GI | 256831269 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.694421 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACA CTGATGTTCT GTCATTGTCC AACGTGACAA AAACTTTCGG CCCCGTTCGC GCACTCGACC ACCTGTCGTT GACGTTAGCC CCGGGGGAGG TGCACGGGTT CCTGGGCCCC AATGGGGCCG GGAAGTCCAC AACGATGCGC ATCCTGTTGG GGATACTTCG CCCTGATGAG GGTGAGGTGC GCATGTTTGG TGGGGACCCG TGGCGTGACG CGGTCGCACT TCACCGGCGT ATGGCTTACG TTCCCGGTGA TGTGGACTTG TGGCCTACCC TCACCGGTGG GGAAATCATC GACATGCTGC TGCGGTTACG TGGCCCCATC AACACTGCAC GCCGCGACGA ACTGATTGAA CGGTTCTCCC TTGACCCACG CAAAAAGACC CGCACCTACT CCAAAGGGAA CCGGCAAAAG GTGGCGCTCA TTGCCGCGCT GGCCGCTGAC GTTGACCTCC TCCTCCTTGA TGAACCAACC GCTGGCCTTG ACCCGCTCAT GGAACACGAG TTCCAGCAAG TCATTCGCGA TGCGGCACAC ACCGGGTGCA CCGTGTTACT TTCCAGCCAC ATCCTGGCGC AAGTCGAAGC CCTCTCGGAT CGTGTCTCTA TTATCCGTCA CGGCACCATC GTGGACTCTG GCACCCTCGC TGACATGCGG CACATGACCC GCACCACCGT CACCGTGGAC ACAACCACCC CACCTGACAC TCTTGCGGCT CTCCCTGGTG TGCATGACGT TCACACGCAA GGCCCACGCA CCACCTTCAG TGTGGACGGG GCACACATGT CAGAAGTCAT GACCCACCTT TCGAACCTCG GCATCCGCTC GTTGACCGCT CACCCACCAA CCCTCGAACA GCTCCTCATG CGCCACTACA ACGACACCCA GGTGACCCCA TGA
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Protein sequence | MTDTDVLSLS NVTKTFGPVR ALDHLSLTLA PGEVHGFLGP NGAGKSTTMR ILLGILRPDE GEVRMFGGDP WRDAVALHRR MAYVPGDVDL WPTLTGGEII DMLLRLRGPI NTARRDELIE RFSLDPRKKT RTYSKGNRQK VALIAALAAD VDLLLLDEPT AGLDPLMEHE FQQVIRDAAH TGCTVLLSSH ILAQVEALSD RVSIIRHGTI VDSGTLADMR HMTRTTVTVD TTTPPDTLAA LPGVHDVHTQ GPRTTFSVDG AHMSEVMTHL SNLGIRSLTA HPPTLEQLLM RHYNDTQVTP
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