Gene Jden_0014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0014 
Symbol 
ID8379214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp15856 
End bp16758 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content60% 
IMG OID645002751 
ProductABC transporter related 
Protein accessionYP_003159996 
Protein GI256831269 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.694421 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACA CTGATGTTCT GTCATTGTCC AACGTGACAA AAACTTTCGG CCCCGTTCGC 
GCACTCGACC ACCTGTCGTT GACGTTAGCC CCGGGGGAGG TGCACGGGTT CCTGGGCCCC
AATGGGGCCG GGAAGTCCAC AACGATGCGC ATCCTGTTGG GGATACTTCG CCCTGATGAG
GGTGAGGTGC GCATGTTTGG TGGGGACCCG TGGCGTGACG CGGTCGCACT TCACCGGCGT
ATGGCTTACG TTCCCGGTGA TGTGGACTTG TGGCCTACCC TCACCGGTGG GGAAATCATC
GACATGCTGC TGCGGTTACG TGGCCCCATC AACACTGCAC GCCGCGACGA ACTGATTGAA
CGGTTCTCCC TTGACCCACG CAAAAAGACC CGCACCTACT CCAAAGGGAA CCGGCAAAAG
GTGGCGCTCA TTGCCGCGCT GGCCGCTGAC GTTGACCTCC TCCTCCTTGA TGAACCAACC
GCTGGCCTTG ACCCGCTCAT GGAACACGAG TTCCAGCAAG TCATTCGCGA TGCGGCACAC
ACCGGGTGCA CCGTGTTACT TTCCAGCCAC ATCCTGGCGC AAGTCGAAGC CCTCTCGGAT
CGTGTCTCTA TTATCCGTCA CGGCACCATC GTGGACTCTG GCACCCTCGC TGACATGCGG
CACATGACCC GCACCACCGT CACCGTGGAC ACAACCACCC CACCTGACAC TCTTGCGGCT
CTCCCTGGTG TGCATGACGT TCACACGCAA GGCCCACGCA CCACCTTCAG TGTGGACGGG
GCACACATGT CAGAAGTCAT GACCCACCTT TCGAACCTCG GCATCCGCTC GTTGACCGCT
CACCCACCAA CCCTCGAACA GCTCCTCATG CGCCACTACA ACGACACCCA GGTGACCCCA
TGA
 
Protein sequence
MTDTDVLSLS NVTKTFGPVR ALDHLSLTLA PGEVHGFLGP NGAGKSTTMR ILLGILRPDE 
GEVRMFGGDP WRDAVALHRR MAYVPGDVDL WPTLTGGEII DMLLRLRGPI NTARRDELIE
RFSLDPRKKT RTYSKGNRQK VALIAALAAD VDLLLLDEPT AGLDPLMEHE FQQVIRDAAH
TGCTVLLSSH ILAQVEALSD RVSIIRHGTI VDSGTLADMR HMTRTTVTVD TTTPPDTLAA
LPGVHDVHTQ GPRTTFSVDG AHMSEVMTHL SNLGIRSLTA HPPTLEQLLM RHYNDTQVTP