Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0004 |
Symbol | |
ID | 8379204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 4618 |
End bp | 5133 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645002739 |
Product | protein of unknown function DUF721 |
Protein accession | YP_003159986 |
Protein GI | 256831259 |
COG category | [R] General function prediction only |
COG ID | [COG5512] Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00476655 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0907524 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGACCT ATGACATTCG TGGGTTACCT TCTCAGATTG AGGTCACTCC CCCAGTTGCG GTAGCAACAG CCGCGTTGAA TCGGGCGAAG GCTGCCGCGC GTGCGCGAGG GTTTCGGCCA TCGAGTGTTG CTCAACGAGA CGATGCGGTG TCCGGTGCTG CTCGGACGCG ACGTGACCCG CAATTGTTGG GTGAGGCGTT GGGAACGTTG TTGACTGAGC GTGGGTGGAC AGCTGATGTC GCGGTGGGCA ATGTTGTGGC ACGGTGGGCT GAGATTGTGG GAACTGAGAT TGCAGAGCAT TCCACTGCAG AGCAGTTTGT TGATGGTGTG TTGTTTGTTC GGGCGCATTC CTCAGCCTGG GCCACCCAGT TGCGTTTTCT TGCTGCCAAT ATTCTGGCTG CGATTGCTCG GGATGTGGGT GAGGGTGTGG TGGAGGAGTT ACGGGTGGTC ACTCCTGATG CGCGTACCGG GTCGAAGGGG AGATTGCGGG TTCAAGGTGG TCGGCCGCGA CGCTGA
|
Protein sequence | MATYDIRGLP SQIEVTPPVA VATAALNRAK AAARARGFRP SSVAQRDDAV SGAARTRRDP QLLGEALGTL LTERGWTADV AVGNVVARWA EIVGTEIAEH STAEQFVDGV LFVRAHSSAW ATQLRFLAAN ILAAIARDVG EGVVEELRVV TPDARTGSKG RLRVQGGRPR R
|
| |