Gene Dbac_3413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3413 
Symbol 
ID8379114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp3852230 
End bp3852859 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content58% 
IMG OID645002650 
Productbeta-lactamase domain protein 
Protein accessionYP_003159901 
Protein GI256831173 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAAG TTACCGTCAT GCCGCTTGGA CCGCTGGATA CAAATTGCTA CGTCGTGCAC 
TCGGACCGTG AGGCCGTGGT CATCGACCCG GGCGGGGAGG CGCAGGAAAT CCTGTCTTTT 
CTTGCCTCCG AAAAGTTGAA CCTGACCGCG ATCCTGAACA CGCACCTGCA TTTCGATCAC 
ATCCAGGGCA ATGCGGACCT GGTCGCGGCC ACGGGATTGA CCGTCATGGC CAGTGCCAAG 
GATGGTTTTC TGCTTGAAAA TGAACTCGGA GGCGGTGGAA TGATGGGCTT TCCGCGCACG 
CCGCCCTTTT CGTATTCGCC GCTGGAGGAA GGAGAGTTGC CCTTGCTCGG CACGACCTGC 
CGCGTGCTGG CCACCCCCGG TCATAGTCCG GGCAGTTTGT CATTTTATTT CCAGGAGCTG 
GGCGCGGTTT TCGTCGGCGA TCTGCTTTTC TACCGCTCCG TGGGGCGCAC CGATTTTCCC 
GGAAGCTCGG AACGCGAACT GATCCGCTCC GTCCGCAGCG CTATTTTTAC CCTGCCCGAA 
GAGACGGTGG TGTATCCCGG TCACGGACCC GAAACCACGG TCGGCCAGGA AAAGCTCAAC 
AATCCGTTTT TTACGGAATT CATCCGTTAG
 
Protein sequence
MLKVTVMPLG PLDTNCYVVH SDREAVVIDP GGEAQEILSF LASEKLNLTA ILNTHLHFDH 
IQGNADLVAA TGLTVMASAK DGFLLENELG GGGMMGFPRT PPFSYSPLEE GELPLLGTTC 
RVLATPGHSP GSLSFYFQEL GAVFVGDLLF YRSVGRTDFP GSSERELIRS VRSAIFTLPE 
ETVVYPGHGP ETTVGQEKLN NPFFTEFIR