Gene Dbac_3359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3359 
Symbol 
ID8379055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3792664 
End bp3794457 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content59% 
IMG OID645002592 
Productpenicillin-binding protein 2 
Protein accessionYP_003159847 
Protein GI256831119 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID[TIGR03423] penicillin-binding protein 2 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.20797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGCAT TTAACACCCC CGAGCGGCCT CAGATATTTT CCGGCCCACC GCTGTTGCTT 
GTGTTTCTGG TGGTTCTTTT TTGCATCTTC AGTATCCGCC TGTGGTATCT GCAAATCTAC
AAAAGTGATT TTTATCAGGG TCGCGCCCAG GAAAACAGAA CCAGGCAGAG CACCATGTTT
TCTCCACGAG GCATCATCCG GGATCGCACC GGGCAGTTGC TGGCGGAAAA CAATCCAGCC
TACGCCCTGG CGCTGGTGCG CGAGGACTGC CCGGACATTC CCAAGACGCT GGACCAGATC
AGCCGTTGGA CCGGCCAGCC TCGGGATGAA CTGCAAAAAG CCTTTGAGAT CGGTCGCAAG
CGGGTCAAAC ATTTTGACGA GCAGGTCATC GTGCCCAATA TCCCGTTTGA GCTTGTGGCC
CTGGTCGAGG CTCACCGGCA GGACTGGCCC GGGCTTGTCA TCGCCGTGCG CCCCAAGCGT
TCCTACGCTT ACGGTGAAAC GCTGGCGCAT GTCCTGGGTT ATGTGGCCAG GGCCAATGAA
GAGGAACTCA TCAATGACCC GGACCTGCAG CTGGGCGACA ACGTCGGCAA GCAGGGCGTT
GAGCTGATGC TTGAGCGCAG GTTGCGCGGA ACCAAGGGTC TTCAGGAGTT TGAGGTCGAT
GCATCCGGGC GGGTGCTGTC CTCGCGGATT GTATCTTCGC CGGTTATGGG CGAAGATTTG
AATTTGAGCA TCTCCCTGCC CTTGCAGGAG ACCGCGACCA AGGCCCTGGG CGACCGTGCA
GGCTCGGTCG TGGCCCTGGA TGCCGACACG GGGGAGGTGC TGGCCCTGGT CAGTCTGCCC
AGCTATGATC CCAATGAGTT TGTTGTCGGC ATCAGTCATG CGAAGTGGAA GGAGTTGCTC
GAAGATCCTC TGCATCCTCT GCAGAACCGG CCAGTGCAAA GCACGTATCC TCCCGGATCC
ATCTTCAAGC TCGCGATAGG GGGGCTTGGG CTTGAGAGCG GCACCGTCAA GCCTTCCTCG
ACCGTGTTTT GTTCCGGCAG TTACAAGCTC GGCAAGCGAG TTTTTCGCTG TTGGAATAAA
GGTGGGCACG GGACGACCGA TTTCAAAAAG TCCCTGCGCG AATCGTGCGA CGTCTATTAT
TATCAGCTTG GGGAACAGCT TGGCGTGGAA GCGATCAGCG ACTTTGCAAT CCGCTGCGGA
TTCGGAGTCA AGACCGGCGT GGAGCTGCCC CACGAGCGGG CCGGAAACAT GCCTACGCCG
GAATGGAAAT TGAACCGCTT TGGAGAAAAA TGGCAGGGCG GAGAGACCTT GAACTACGCC
ATCGGTCAGG GATACACACT GACTACGCCT TTGCAGGTGG CCAGGTTTGT CGCGGCCCTG
GTCAATGACG GGAAGATCCT GCGGCCGACC CTGCTTTTAT CCGAGAAGCC CGACGTGGTG
GGCGAACTGC CCATGCGTCC CGCGACCAGG AAGCTGATTC TCGACGCCAT GGTGGCCACG
GTGGAGGAGG AGCGGGGCAC TGCCCGGGTT CTTCGCCGTC CCGGACTCAG GATCGGAGGC
AAGACCGGCA CGGCCCAGGT CGTCAAGCTG CTGGACAAGT ACGAAAAGAA AAAGACAAAT
GAAATCCCCT ATAAATACAG GGATCACGCC TGGATGGCCA GCTTCGGGGA AAAGGACGGG
AAGCGTTTCG TTGTCGTGTC CATGGTCGAG CACGGCGGTC ATGGCGGTTC GGATGCGGGC
CCCGTGGCCG GTGCGGTGCT CGACGCTCTC TTGGGCGTTC AATCGGAAGA GTGA
 
Protein sequence
MGAFNTPERP QIFSGPPLLL VFLVVLFCIF SIRLWYLQIY KSDFYQGRAQ ENRTRQSTMF 
SPRGIIRDRT GQLLAENNPA YALALVREDC PDIPKTLDQI SRWTGQPRDE LQKAFEIGRK
RVKHFDEQVI VPNIPFELVA LVEAHRQDWP GLVIAVRPKR SYAYGETLAH VLGYVARANE
EELINDPDLQ LGDNVGKQGV ELMLERRLRG TKGLQEFEVD ASGRVLSSRI VSSPVMGEDL
NLSISLPLQE TATKALGDRA GSVVALDADT GEVLALVSLP SYDPNEFVVG ISHAKWKELL
EDPLHPLQNR PVQSTYPPGS IFKLAIGGLG LESGTVKPSS TVFCSGSYKL GKRVFRCWNK
GGHGTTDFKK SLRESCDVYY YQLGEQLGVE AISDFAIRCG FGVKTGVELP HERAGNMPTP
EWKLNRFGEK WQGGETLNYA IGQGYTLTTP LQVARFVAAL VNDGKILRPT LLLSEKPDVV
GELPMRPATR KLILDAMVAT VEEERGTARV LRRPGLRIGG KTGTAQVVKL LDKYEKKKTN
EIPYKYRDHA WMASFGEKDG KRFVVVSMVE HGGHGGSDAG PVAGAVLDAL LGVQSEE