| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3349 |
|---|
| Symbol | |
|---|
| ID | 8379045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 3782491 |
|---|
| End bp | 3783963 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645002582 |
|---|
| Product | ribonuclease, Rne/Rng family |
|---|
| Protein accession | YP_003159837 |
|---|
| Protein GI | 256831109 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1530] Ribonucleases G and E |
|---|
| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGAGA AGCAGAAGCG CAAGATGTTC ATCAGCGTGC TGCCTGGCGA ACAGGTGGAA
GTGGCCATCA TGGAAGATGG CGTGGTGTGC GAATATTATG TTGAAATGCT CCACCAGAGC
AAGACCAAGG GAAACATCTA CAAGGCCAGG ATCCACAACG TGGACCAGGC CCTGCAGGCC
GCCTTCATCA ATTACGGGGC GGAAAAGAAC GGATTTTTGC AGGTCGACGA GGTTCATCCT
GAATATTACC AGGGCGATGT GCCCAGCCGG GGCAAGTACC CGCCCCTGCA GAAGGTTTTA
AAGCCCGGCC AGGAAGTGCT GGTGCAGGTG GTCAAGGAGC CGACCGGCTC CAAGGGTGCA
TTCCTGACCA CGTATCTGTC CATCCCCGGC CGCTATTTCG TACTCACCCC CGGCCGCGAA
CAGCTCGGCA TTTCCCGCAA GATCGAAGAT GAAAAGGAGC GCGACCGCTT GAAAGAGGTC
GTCGAGGAGC TCAAGCTCGA CGAAGGCCTG GGCGTCATCG TGCGCACGGT CAGCGAGTCC
CAGAGCAAGA GCAGCCTGTC GCGGGATTTG CAGTTCCTGA AGCGCCTGTG GAAAGAGATC
CGCAAAAAGG GAATCTCCTC TGAATCCCCG GCCCTTATCT ATGAGGAAAA GGATCTGGCC
TTTCGGGCCA TCCGCGACTA CCTCACTCCC GACATCGCCG AATGCTGGGT TGATGATGAC
GAGACCGCGA AGCAGATCAC TGATTTCGCC GCCCTTATTT TTCCCCGCCG CAAGACATTC
ATCAAGGTGC ACTCCGAAAC CGAGCGGACT CTGTATGAGC GTTTTCGCAT CGAGGCGCAG
CTGCAGAAGA TTTTCAGCCG TAGCGTCAAT CTGCCCAGCG GCGGCCAACT GGTCATCGAC
CACACCGAGG CCCTGACGGC CATCGACATC AACTCCGGCA AGATCGGCGG CGAAAAGAAT
TTCAAGGAGA TGGCTCTGCG CACCAATATC GAGGCCGCGC AGGAAATCCC CAATCAGCTC
ATGCTGCGCG ACATCGGCGG CCAGATCGTG GTCGATTTCA TCGAGATGAA GGACGGCAAG
CACATCCGCG AAGTGGAGAA GGTGCTGCGC CAGGCCCTGA AAGTCGACCG TGCGCGCACG
GATATCGGCC GCATCTCCAA GTTCGGCCTG CTTGAGATTG TTCGCCAGCG TCTGGGCACG
TCGGCCCTGT CCGGAAGCCT GGAGCCGTGT CCGCACTGCT CCGGCGCGGG CACCCGCCGC
AATCTGGAAT GGCGCTCCAT GCAGGCGTTG AAAGACATTT ATCGTGAACT GCGCAAGGAC
AAGAGCTTTG AGCCGTTCAC CTACAAGACG GACGCGGATC TCATGCAGTA TCTTGTCAAC
CGCAAGCGGG AAAAGCTCAT GGAATTTGAG CAGACATTCG GTCGCAAGAT CTTCGTCATG
CCTACGGAAA CGCCCAACTG CGCATTTTGC TAG
|
|---|
| Protein sequence | MGEKQKRKMF ISVLPGEQVE VAIMEDGVVC EYYVEMLHQS KTKGNIYKAR IHNVDQALQA
AFINYGAEKN GFLQVDEVHP EYYQGDVPSR GKYPPLQKVL KPGQEVLVQV VKEPTGSKGA
FLTTYLSIPG RYFVLTPGRE QLGISRKIED EKERDRLKEV VEELKLDEGL GVIVRTVSES
QSKSSLSRDL QFLKRLWKEI RKKGISSESP ALIYEEKDLA FRAIRDYLTP DIAECWVDDD
ETAKQITDFA ALIFPRRKTF IKVHSETERT LYERFRIEAQ LQKIFSRSVN LPSGGQLVID
HTEALTAIDI NSGKIGGEKN FKEMALRTNI EAAQEIPNQL MLRDIGGQIV VDFIEMKDGK
HIREVEKVLR QALKVDRART DIGRISKFGL LEIVRQRLGT SALSGSLEPC PHCSGAGTRR
NLEWRSMQAL KDIYRELRKD KSFEPFTYKT DADLMQYLVN RKREKLMEFE QTFGRKIFVM
PTETPNCAFC
|
|---|
| |