Gene Dbac_3300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3300 
Symbol 
ID8378996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3735373 
End bp3736356 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content58% 
IMG OID645002533 
Productpolysaccharide deacetylase 
Protein accessionYP_003159788 
Protein GI256831060 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.821044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAA CGGTTCTTTC CCTTACGCAA TCCCTTTTAG GCGCAAGCAT TCCAGTACTG 
TGCTACCATC AGGTGCGCCC GGACAGCGGC ATGACACCGG AAAAATTCGG CTCCCACCTG
GACCTGATCC GCAAGCTGGG CTTTGAAACC ATAAGCCTGG CCCGGCTATA CGATGTCATC
ACCGGAAAAG AAAAACTCAC CTTTCCAGCC ATCGTCATCA CCTTCGACGA CTGCACCCTG
GACAACTGGG TCTACGCCGT GCCGGAACTG CTGCGCCGAA ACATGAAGGG CGTCTTTTTC
GCCATCACCA ACTTTCTGCG CCCAGGCAAA GCCCGTCCGC GCGCGGATCA AACCATGCAA
CCGGCAGGAG TGCCTGCGTT TGGCGACATC ATGCAGCAGG CCTTGTCCGG AAACTGCGAC
GGATTCATGA ACGAGGGCGA AATCCGCGCC GTGGTGCATG ACCTAGACAT GGAAGTGTAC
TCGCACTCCG CCGCGCACCA GGCCTGCTTC ACCAGCAACG AACCGAACGG CACCCTCGGC
GACGAAAAAC ACTGGAGCCA CAAAGCCCTT TGCGGCCCAA ACGCAGCAGC CGACTCCCCG
GTATACCCGG TGGGTAGCGC TTACGCCCAC ACGGGCTTCG GGCTGGACTG GAACAGCGCT
CCCTTGCTAA TCGCGGAGAA GGAAGAACGT TTGGCATTGT GCCTCAAAGA TTTCAGCCGG
GCCAAAAAAG AGTTGGAGAC AATCCTGGAT CGCCCCTGCC CATATATATG CCTACCCTGG
GGACAATTCG ACGAAACAAC CCTTGAGGCC AGCATCAAGG CCGGATACCT AGGCGCGCTG
ACTCTTGAAC GGACCTTTGT CGGCCCAGGC TCGCCTAGGC AACGTATCGG CCGCATCGCC
GTGAAGGACG CCAACAGCCC GACATGGCTC AGAAACAAAC TTTTCCTCCA CGCCCACACG
CTCACCTCGA AAATCTTCCG CTAG
 
Protein sequence
MSKTVLSLTQ SLLGASIPVL CYHQVRPDSG MTPEKFGSHL DLIRKLGFET ISLARLYDVI 
TGKEKLTFPA IVITFDDCTL DNWVYAVPEL LRRNMKGVFF AITNFLRPGK ARPRADQTMQ
PAGVPAFGDI MQQALSGNCD GFMNEGEIRA VVHDLDMEVY SHSAAHQACF TSNEPNGTLG
DEKHWSHKAL CGPNAAADSP VYPVGSAYAH TGFGLDWNSA PLLIAEKEER LALCLKDFSR
AKKELETILD RPCPYICLPW GQFDETTLEA SIKAGYLGAL TLERTFVGPG SPRQRIGRIA
VKDANSPTWL RNKLFLHAHT LTSKIFR