Gene Dbac_3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3259 
Symbol 
ID8378955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3689094 
End bp3690350 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content37% 
IMG OID645002494 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_003159749 
Protein GI256831021 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA ATTTATTATT TAAATCTGCA TCAATATATA TAGTGACAGG AGTTGCGAAT 
AGCGCAATTC CTTTTATTCT GCTGCCGATT TTGACAAGAG TTTTGTCTCC ATCAGAGTAT
GGGAAGATTG TAATGTTCTC TAGTGCTTTT GTTGTTATTT CTTCTATTGT ATGTCTAAGT
GTTCATGGTT CTGTATCTGT GAAGTATTTT GATATAAATA TCGATCACCC TCGATATCTA
GCGACAAGTT TGATGGTTGT TTTTCCAAGT GCTATGTTTT GTATTTTTTT TATAATTGTT
TTTAGCAATC CCTTGTCGCG TTATGTTGGT ATTTCACATT GGTGGCTGAT TTTTGCTGCA
TTAGCTTCAG TAGCTCAGTT TATTGTTCAG CTTCGTTTAT TAATGTGGCA AGTTTCTCAT
AATGCTTTCA AATATGGTGT TTTTGTTGTT TCGCAGACGG TCATGAATCT GGCTATTTCT
TTATTTTTTG TTCTAGGATT GAGCTACGGG TGGGAAGGTA GGGGAGTTGG AATAGTTTTA
TCTATGTTTT TATTTGGTAT AGTTGCCTTT TTAAGTATGC AAGTGGCAGG AATGCTGCGA
TGGAAATTTA GTTTCATGTA TGCAAAATCG ATGCTTAAAT TTGGAATCCC GCTTATTCCA
CATTCAGTAG GTGGCTTGTT GATGTCAATG ACTGATAGAT TTGCAATTTC TGCATTGATT
GGTATTGAAG AGGCTGGTGT GTATGCGGCT GCGATGCAAA TAGGGCTGAT TGTTTTTGTT
GTTTCAGATG CATGTAATAA GTCATTTGCG CCGTGGTTGT TTAGTATTTT AAGTAAAAAT
GACGAAAGCG AAAAAATTAA AATTGTAAAA TATACATATT TTTTATTTTT TGCGATACCT
GTGCTGGCAT ATTTTTTTGG GAAGATCGCA CCATGGTTGT TGCAATTCGT GGTTGGCTCA
CAGTATCAGA GTGGCTCAGG CGCAGTGCTT TTTATAGCCC TTGGAGGAGG ATTTGGGGCT
ATGTATTATC TCGTTGCAAA TTACGTGTTT TATGCAGAAA AGACCGGAGC GCTGGCTTGT
GTTACCTTGT TTTCTGGGGT GGTTAACGTG GTTCTTGCCA TGCTTCTGGT CAAGGCAAAC
GGTTCTGTCG GTGCTGCCCA GGCCTATATG GCGTCTCAAA TAATATGCTT TTTTTTGACA
TGGATTATTG CAGGTAATGT TTACTCTATG CCATGGAAGT TTTTTATTTG GAAATAG
 
Protein sequence
MKLNLLFKSA SIYIVTGVAN SAIPFILLPI LTRVLSPSEY GKIVMFSSAF VVISSIVCLS 
VHGSVSVKYF DINIDHPRYL ATSLMVVFPS AMFCIFFIIV FSNPLSRYVG ISHWWLIFAA
LASVAQFIVQ LRLLMWQVSH NAFKYGVFVV SQTVMNLAIS LFFVLGLSYG WEGRGVGIVL
SMFLFGIVAF LSMQVAGMLR WKFSFMYAKS MLKFGIPLIP HSVGGLLMSM TDRFAISALI
GIEEAGVYAA AMQIGLIVFV VSDACNKSFA PWLFSILSKN DESEKIKIVK YTYFLFFAIP
VLAYFFGKIA PWLLQFVVGS QYQSGSGAVL FIALGGGFGA MYYLVANYVF YAEKTGALAC
VTLFSGVVNV VLAMLLVKAN GSVGAAQAYM ASQIICFFLT WIIAGNVYSM PWKFFIWK